SPDEF Gene Summary [Human]

The protein encoded by this gene belongs to the ETS family of transcription factors. It is highly expressed in the prostate epithelial cells, and functions as an androgen-independent transactivator of prostate-specific antigen (PSA) promoter. Higher expression of this protein has also been reported in brain, breast, lung and ovarian tumors, compared to the corresponding normal tissues, and it shows better tumor-association than other cancer-associated molecules, making it a more suitable target for developing specific cancer therapies. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2011]

Details

Type
Protein Coding
Official Symbol
SPDEF
Official Name
SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]
Ensembl ID
ENSG00000124664
Bio databases IDs NCBI: 25803 Ensembl: ENSG00000124664
Aliases SAM pointed domain containing ETS transcription factor
Synonyms bA375E1.3, LOC687360, PDEF, Pse, SAM pointed domain containing ETS transcription factor, Spdef1
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human SPDEF often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • RNA polymerase II transcription factor activity, sequence-specific DNA binding
  • Sterile alpha motif (SAM)/Pointed domain
  • transcription regulator
  • double-stranded DNA binding
  • SAM (Sterile alpha motif )
  • Ets-domain
  • protein binding
  • sequence-specific DNA binding

Pathways

Biological processes and signaling networks where the SPDEF gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • epithelial cancer
  • neoplasia
  • tumorigenesis
  • prostatic carcinoma
  • prostate cancer
  • breast cancer
  • lung adenocarcinoma
  • lung adenocarcinoma formation
  • insomnia
  • HER2 negative hormone receptor negative breast cancer
regulated by
regulates
role in cell
  • expression in
  • transactivation in
  • production in
  • apoptosis
  • activation
  • morphology
  • migration
  • cellular infiltration by
  • growth
  • cell cycle progression

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • cell surface
  • chromatin

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human SPDEF gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • lung goblet cell differentiation
  • transcription from RNA polymerase II promoter
  • positive regulation of transcription from RNA polymerase II promoter
  • intestinal epithelial cell development
  • glandular epithelial cell development
  • regulation of transcription from RNA polymerase II promoter
  • negative regulation of transcription from RNA polymerase II promoter
  • positive regulation of apoptotic process
  • cell differentiation
  • epithelial cell fate commitment
  • positive regulation of cell fate commitment
  • negative regulation of cell fate commitment

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • chromatin

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • sequence-specific DNA binding
  • sequence-specific DNA binding RNA polymerase II transcription factor activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.