PTPRB Gene Summary [Human]

The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic transformation. This PTP contains an extracellular domain, a single transmembrane segment and one intracytoplasmic catalytic domain, thus belongs to receptor type PTP. The extracellular region of this PTP is composed of multiple fibronectin type_III repeats, which was shown to interact with neuronal receptor and cell adhesion molecules, such as contactin and tenascin C. This protein was also found to interact with sodium channels, and thus may regulate sodium channels by altering tyrosine phosphorylation status. The functions of the interaction partners of this protein implicate the roles of this PTP in cell adhesion, neurite growth, and neuronal differentiation. Alternate transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2011]

Details

Type
Protein Coding
Official Symbol
PTPRB
Official Name
protein tyrosine phosphatase receptor type B [Source:HGNC Symbol;Acc:HGNC:9665]
Ensembl ID
ENSG00000127329
Bio databases IDs NCBI: 5787 Ensembl: ENSG00000127329
Aliases protein tyrosine phosphatase receptor type B
Synonyms 3230402H02Rik, C130094E24, HPTPB, HPTP-BETA, HPTP-β, LOC100504392, LOC102546841, LOC688895, protein tyrosine phosphatase receptor type B, protein tyrosine phosphatase, receptor type, B, PTPB, Ptprbl1, Ptpz, PTP-β, Rptpb, R-PTP-BETA, R-PTP-β, VE-PTP
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human PTPRB often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • extracellular domain
  • protein-tyrosine-phoshatase
  • catalytic domain
  • carbonic anhydrase domain
  • Protein tyrosine phosphatase, catalytic domain
  • beta-trefoil_Ricin_MRC-like
  • Fibronectin type 3 domain
  • PTP_DSP_cys
  • protein binding
  • Protein tyrosine phosphatase, catalytic domain motif
  • Protein tyrosine phosphatase, catalytic domain, undefined specificity
  • TM proximal of protein tyrosine phosphatase, receptor type J
  • Protein-tyrosine phosphatase
  • FNIII-like repeat
  • cytoplasmic domain
  • transmembrane receptor protein tyrosine phosphatase
  • FN3
  • spacer domain
  • transmembrane domain
  • intracellular domain
  • cadherin binding
  • transmembrane receptor

Pathways

Biological processes and signaling networks where the PTPRB gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • glomerulosclerosis
  • retinal neovascularization
  • diabetes mellitus
  • interstitial fibrosis
  • papillary thyroid carcinoma
  • papillary thyroid cancer
regulated by
  • IGF1
  • Immunoglobulin
  • beta-estradiol
  • IFNG
  • VEGFA
  • lipopolysaccharide
  • ERBB2
  • reactive oxygen species
  • KDM1A
  • tetradecanoylphorbol acetate
regulates
role in cell
  • expression in
  • migration
  • activation in
  • adhesion
  • permeability
  • phosphorylation in
  • differentiation
  • accumulation
  • formation
  • formation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • cellular membrane
  • tertiary granule membrane
  • specific granule membrane

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human PTPRB gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • angiogenesis
  • protein dephosphorylation
  • dephosphorylation
  • phosphate-containing compound metabolic process
  • glial cell migration

Cellular Component

Where in the cell the gene product is active
  • receptor complex
  • plasma membrane
  • tertiary granule membrane
  • specific granule membrane

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • cadherin binding
  • transmembrane receptor protein tyrosine phosphatase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.