ATRIP Gene Summary [Human]

This gene encodes an essential component of the DNA damage checkpoint. The encoded protein binds to single-stranded DNA coated with replication protein A. The protein also interacts with the ataxia telangiectasia and Rad3 related protein kinase, resulting in its accumulation at intranuclear foci induced by DNA damage. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Aug 2012]

Details

Type
Protein Coding
Official Symbol
ATRIP
Official Name
ATR interacting protein [Source:HGNC Symbol;Acc:HGNC:33499]
Ensembl ID
ENSG00000164053
Bio databases IDs NCBI: 84126 Ensembl: ENSG00000164053
Aliases ATR interacting protein
Synonyms 6620401K05RIK, ATR interacting protein, LOC100911807
Species
Human, Homo sapiens
OrthologiesRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human ATRIP often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • kinase
  • Prefoldin subunit
  • Control of competence regulator ComK, YlbF/YmcA
  • Ezrin/radixin/moesin, alpha-helical domain
  • prefoldin
  • coiled-coil domain
  • protein binding
  • Outer membrane protein (OmpH-like)
  • Domain of unknown function (DUF4200)
  • phosphorylation site

Pathways

Biological processes and signaling networks where the ATRIP gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • breast carcinoma
  • hereditary disorder
  • systemic lupus erythematosus
  • migraines
  • Aicardi-Goutieres syndrome 1
  • TREX1-related disorder
  • chilblain lupus 1
  • vasculopathy, retinal, with cerebral leukodystrophy
  • autosomal dominant Aicardi-Goutieres syndrome type 1
  • thrombotic microangiopathy
regulated by
role in cell
  • phosphorylation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear foci
  • nucleoplasm

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human ATRIP gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • DNA damage checkpoint
  • DNA repair
  • regulation of double-strand break repair
  • nucleobase-containing compound metabolic process

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • ATR-ATRIP complex
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • K63-linked polyubiquitin binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.