RPL13A

RPL13A Gene Summary

Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a member of the L13P family of ribosomal proteins that is a component of the 60S subunit. The encoded protein also plays a role in the repression of inflammatory genes as a component of the IFN-gamma-activated inhibitor of translation (GAIT) complex. This gene is co-transcribed with the small nucleolar RNA genes U32, U33, U34, and U35, which are located in the second, fourth, fifth, and sixth introns, respectively. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed throughout the genome. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Jul 2012]

Details

Type
Protein Coding
Official Symbol
RPL13A
Official Name
ribosomal protein L13a [Source:HGNC Symbol;Acc:HGNC:10304]
Ensembl ID
ENSG00000142541
Bio databases IDs NCBI: 23521 Ensembl: ENSG00000142541
Aliases ribosomal protein L13a
Synonyms
1810026N22Rik,L13A,Ribol13a,ribosomal protein L13A,TSTA1,Tstap198-7,tum-antigen,uL13
Species
Human, Homo sapiens

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Ribosomal protein L13
  • Ribosomal_L13
  • structural constituent of ribosome
  • mRNA binding

Pathways

Biological processes and signaling networks where the RPL13A gene plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
  • SURF6
  • PPAN-P2RY11
  • MRPS30
  • FAM90A1
  • RPA3
  • BTNL9
  • CLUH
  • EPB41L5
  • RPL37
  • C9orf72
disease
  • cholangiocarcinoma
  • cholangiocarcinoma cancer
  • Parkinson disease
  • myelodysplastic syndrome
regulated by
  • SPEN
  • RRP1B
  • poly rI:rC-RNA
  • SOD1
  • cisplatin
  • MYC
  • torin1
  • beta-estradiol
  • fluvoxamine
  • LH
regulates
  • IL1B
  • PTGER4
  • Cxcl1
  • IL17A
  • Ccl3
  • VWF
  • IL6
  • RPS8
  • LDLR
  • RPL30
role in cell
  • binding in
  • cellular infiltration by
  • expression in
  • cell death
  • production in
  • replication in
  • binding
  • phagocytic capacity
  • response by
  • translation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • cell surface
  • ribosome
  • Nucleus
  • cytosol
  • nucleoli
  • synapse
  • chromatin

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the RPL13A gene, providing context for its role in the cell.

BIOLOGICAL PROCESS

Functions and activities the gene product is involved in
  • macrophage chemotaxis
  • cytoplasmic translation
  • homeostatic process
  • response to lipopolysaccharide
  • cellular response to interferon-gamma
  • negative regulation of translation
  • lung morphogenesis
  • translation

CELLULAR COMPONENT

Where in the cell the gene product is active
  • nucleus
  • focal adhesion
  • cytosolic ribosome
  • cytoplasm
  • membrane
  • cytosol
  • large ribosomal subunit
  • cytosolic large ribosomal subunit
  • synapse
  • nucleolus
  • ribosome

MOLECULAR FUNCTION

What the gene product does at the molecular level
  • RNA binding
  • structural constituent of ribosome
  • mRNA binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.