ATP6V0D1 Gene Summary [Human]

This gene encodes a component of vacuolar ATPase (V-ATPase), a multisubunit enzyme that mediates acidification of eukaryotic intracellular organelles. V-ATPase dependent organelle acidification is necessary for such intracellular processes as protein sorting, zymogen activation, receptor-mediated endocytosis, and synaptic vesicle proton gradient generation. V-ATPase is composed of a cytosolic V1 domain and a transmembrane V0 domain. The V1 domain consists of three A and three B subunits, two G subunits plus the C, D, E, F, and H subunits. The V1 domain contains the ATP catalytic site. The V0 domain consists of five different subunits: a, c, c', c'', and d. Additional isoforms of many of the V1 and V0 subunit proteins are encoded by multiple genes or alternatively spliced transcript variants. This encoded protein is known as the D subunit and is found ubiquitously. [provided by RefSeq, Jul 2008]

Details

Type
Retained Intron
Official Symbol
ATP6V0D1
Official Name
ATPase H+ transporting V0 subunit d1 [Source:HGNC Symbol;Acc:HGNC:13724]
Ensembl ID
ENSG00000159720
Bio databases IDs NCBI: 9114 Ensembl: ENSG00000159720
Aliases ATPase H+ transporting V0 subunit d1, V-ATPase subunit d1
Synonyms Ac39, ATP6D, ATP6DV, ATPase, H+ transporting, lysosomal V0 subunit D1, ATPase H+ transporting V0 subunit D1, LOC100132855, P39, V-ATPase V0-d1, VATX, VMA6, VPATPD
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human ATP6V0D1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • binding protein
  • Protein of unknown function (DUF2764)
  • H+-transporting two-sector ATPase
  • ATP synthase (C/AC39) subunit
  • hydrogen-transporting ATPase activity, rotational mechanism
  • protein binding
  • transporter

Pathways

Biological processes and signaling networks where the ATP6V0D1 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
disease
  • age-related macular degeneration
  • Alzheimer disease
  • psoriasis
  • Parkinson disease
  • infection by vesicular stomatitis virus
regulated by
regulates
role in cell
  • growth
  • replication in
  • Clathrin mediated endocytosis by
  • homeostasis in
  • acidification in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • membrane fraction
  • synaptic vesicle membrane
  • cellular membrane
  • vesicles
  • centrosome
  • apical membrane
  • lysosome membrane
  • endosomal membrane
  • synaptic vesicles
  • early endosomes
  • microsomal membrane
  • axon terminals
  • phagosomes

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human ATP6V0D1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • cellular iron ion homeostasis
  • cilium morphogenesis
  • regulation of macroautophagy
  • vacuolar transport
  • vacuolar acidification

Cellular Component

Where in the cell the gene product is active
  • plasma membrane proton-transporting V-type ATPase complex
  • lysosomal membrane
  • axon terminus
  • vacuolar proton-transporting V-type ATPase, V0 domain
  • early endosome
  • centrosome
  • extracellular vesicular exosome
  • membrane
  • vacuolar proton-transporting V-type ATPase complex
  • phagocytic vesicle membrane
  • endosome membrane
  • synaptic vesicle membrane
  • apical plasma membrane
  • clathrin coated vesicle membrane

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • proton-transporting ATPase activity, rotational mechanism

Gene-Specific Assays for Results You Can Trust

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