ATP6V0C Gene Summary [Human]

This gene encodes a component of vacuolar ATPase (V-ATPase), a multisubunit enzyme that mediates acidification of eukaryotic intracellular organelles. V-ATPase dependent organelle acidification is necessary for such intracellular processes as protein sorting, zymogen activation, receptor-mediated endocytosis, and synaptic vesicle proton gradient generation. V-ATPase is composed of a cytosolic V1 domain and a transmembrane V0 domain. The V1 domain consists of three A and three B subunits, two G subunits plus the C, D, E, F, and H subunits. The V1 domain contains the ATP catalytic site. The V0 domain consists of five different subunits: a, c, c', c", and d. This gene encodes the V0 subunit c. Alternative splicing results in transcript variants. Pseudogenes have been identified on chromosomes 6 and 17. [provided by RefSeq, Nov 2010]

Details

Type
Protein Coding
Official Symbol
ATP6V0C
Official Name
ATPase H+ transporting V0 subunit c [Source:HGNC Symbol;Acc:HGNC:855]
Ensembl ID
ENSG00000185883
Bio databases IDs NCBI: 527 Ensembl: ENSG00000185883
Aliases ATPase H+ transporting V0 subunit c, V-ATPase subunit c
Synonyms 16K, ATP6C, Atp6c2, ATP6L, ATPase, H+ transporting, lysosomal V0 subunit C, ATPase H+ transporting V0 subunit C, ATPL, Atpl-rs1, EPEO3, PL16, Vacuolar H+ ATPase Proton Channel Subunit, VATL, V-ATPase C subunit, V-ATPase V0-c, Vma3, VPPC
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human ATP6V0C often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • ATP synthase subunit C
  • ubiquitin protein ligase binding
  • PRK13469
  • transmembrane domain
  • ATP synthase, membrane-bound Fo/Vo/Ao complexes, subunit c
  • hydrogen-transporting ATPase activity, rotational mechanism
  • protein binding
  • hydrogen-transporting ATP synthase activity, rotational mechanism
  • H+-exporting ATPase
  • transporter

Pathways

Biological processes and signaling networks where the ATP6V0C gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • infection by HIV-1
  • early-onset epilepsy with developmental delay 3
  • early-onset epilepsy without developmental delay type 3
  • early-onset epilepsy with or without developmental delay 3
  • childhood onset epilepsy syndrome
regulated by
regulates
role in cell
  • expression in
  • replication in
  • binding in
  • growth
  • invasion
  • formation
  • morphology
  • Clathrin mediated endocytosis by
  • communication by
  • endocytosis by

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • detergent resistant lipid raft fraction
  • synaptic vesicle membrane
  • perinuclear region
  • cellular membrane
  • Plasma Membrane
  • secretory granule membrane
  • cytoplasmic particles
  • tertiary granule membrane
  • lysosome membrane
  • endosomal membrane
  • synaptic vesicles
  • ruffled borders
  • phagosomes

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human ATP6V0C gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • intracellular pH reduction
  • endosomal lumen acidification
  • lysosomal lumen acidification
  • regulation of macroautophagy
  • vacuolar acidification
  • positive regulation of Wnt receptor signaling pathway
  • ATP synthesis coupled proton transport

Cellular Component

Where in the cell the gene product is active
  • proton-transporting V-type ATPase complex
  • Golgi membrane
  • lysosomal membrane
  • plasma membrane
  • vacuolar proton-transporting V-type ATPase, V0 domain
  • extracellular vesicular exosome
  • focal adhesion
  • membrane
  • phagocytic vesicle membrane
  • endosome membrane
  • synaptic vesicle membrane
  • azurophil granule membrane
  • tertiary granule membrane
  • clathrin coated vesicle membrane

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • ubiquitin protein ligase binding
  • proton-transporting ATPase activity, rotational mechanism
  • hydrogen ion transporting ATP synthase activity, rotational mechanism

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.