PDPN Gene Summary [Human]

This gene encodes a type-I integral membrane glycoprotein with diverse distribution in human tissues. The physiological function of this protein may be related to its mucin-type character. The homologous protein in other species has been described as a differentiation antigen and influenza-virus receptor. The specific function of this protein has not been determined but it has been proposed as a marker of lung injury. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
PDPN
Official Name
podoplanin [Source:HGNC Symbol;Acc:HGNC:29602]
Ensembl ID
ENSG00000162493
Bio databases IDs NCBI: 10630 Ensembl: ENSG00000162493
Aliases podoplanin, lung type I cell membrane associated glycoprotein
Synonyms AGGRUS, D2-40, E11, GP36, Gp38, GP40, HT1A-1, OTS-8, PA2.26, PODOPLANIN, RANDAM-2, RTI140, RTI40, T1A, T1A-2, T1-alpha, T1-α, TI1A
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human PDPN often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • chemokine binding
  • Podoplanin
  • protein binding
  • receptor binding
  • chaperone binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • squamous cell skin cancer
  • epithelial cancer
  • epithelial neoplasia
  • neoplasia
  • non-small cell lung cancer
  • glioblastoma
  • glioblastoma cancer
  • sarcomatoid malignant mesothelioma
  • mesothelioma formation
  • atelectasis
regulated by
regulates
role in cell
  • apoptosis
  • aggregation
  • phosphorylation in
  • expression in
  • proliferation
  • adhesion
  • formation in
  • formation
  • colony formation
  • migration

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • membrane fraction
  • tetraspanin-enriched microdomain
  • cell junction
  • ruffle
  • Cytoplasm
  • invadopodia
  • cell surface
  • microvesicles
  • cellular membrane
  • Nucleus
  • Mitochondria
  • cytoplasmic aggregates
  • cytosol
  • membrane ruffles
  • plasma membrane extracellular face
  • apical membrane
  • basolateral membrane
  • cell membrane-lagging edges
  • cytoplasmic vesicles
  • peroxisomes
  • membrane rafts
  • cellular protrusions
  • microvilli
  • filopodia
  • cell membrane leading edge
  • lamellipodia

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human PDPN gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • regulation of cell shape
  • wound healing, spreading of cells
  • folic acid transport
  • signal transduction
  • negative regulation of cell proliferation
  • regulation of lamellipodium morphogenesis
  • regulation of substrate adhesion-dependent cell spreading
  • cell adhesion
  • lymph node development
  • Rho protein signal transduction
  • amino acid transport
  • positive regulation of epithelial to mesenchymal transition
  • positive regulation of extracellular matrix disassembly
  • water transport
  • lymphatic endothelial cell fate commitment
  • actin-mediated cell contraction
  • negative regulation of apoptotic process
  • lymphangiogenesis
  • cell migration
  • platelet activation
  • positive regulation of cell migration
  • lung development

Cellular Component

Where in the cell the gene product is active
  • cell projection
  • tetraspanin-enriched microdomain
  • plasma membrane
  • filopodium membrane
  • microvillus membrane
  • anchoring junction
  • membrane
  • mitochondrion
  • membrane raft
  • ruffle
  • filopodium
  • cytoplasmic vesicle
  • ruffle membrane
  • cell junction
  • cytosol
  • basolateral plasma membrane
  • apical plasma membrane
  • lamellipodium
  • lamellipodium membrane

Molecular Function

What the gene product does at the molecular level
  • chemokine binding
  • folic acid transporter activity
  • protein binding
  • water transmembrane transporter activity
  • chaperone binding
  • water channel activity
  • amino acid transmembrane transporter activity
  • receptor binding

Gene-Specific Assays for Results You Can Trust

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