H3-3A Gene Summary [Human]

Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene contains introns and its mRNA is polyadenylated, unlike most histone genes. The protein encoded is a replication-independent member of the histone H3 family. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
H3-3A
Official Name
H3.3 histone A [Source:HGNC Symbol;Acc:HGNC:4764]
Ensembl ID
ENSG00000163041
Bio databases IDs NCBI: 3020 Ensembl: ENSG00000163041
Aliases H3.3 histone A
Synonyms BRYLIB1, EyeLinc14, H3.3, H3.3A, H3-3B, H3.3 histone A, H3F3, H3F3A, Histone H3.3, LOC100045490
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human H3-3A often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • structural constituent of chromatin
  • histone fold domain (HFD) superfamily
  • binding protein
  • double-stranded DNA binding
  • nucleic acid binding
  • Core histone H2A/H2B/H3/H4
  • chromatin binding
  • protein binding
  • sequence-specific DNA binding
  • DNA binding
  • Histone H3

Pathways

Biological processes and signaling networks where the H3-3A gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • brain neoplasm
  • head and neck neoplasia
  • diffuse infiltrative glioma
  • glioma formation
  • pediatric diffuse intrinsic pontine glioma
  • pediatric gliomatosis
  • glioma cancer
  • brain glioma formation
  • pediatric cancer
regulated by
  • sirolimus
  • SYK/ZAP
  • HNRNPH1
  • romidepsin
  • N-acetyl-L-cysteine
  • bafilomycin
  • CIGB-300
  • NP-KLH
  • etoposide
  • DAXX
regulates
role in cell
  • cell cycle progression
  • growth
  • proliferation
  • cell death
  • expression in
  • activation in
  • phosphorylation in
  • differentiation
  • quantity
  • formation

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • Extracellular Space
  • chromosome
  • nucleosomes
  • nucleoplasm
  • Barr body
  • kinetochores
  • centromeres
  • telomeres
  • chromatin

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human H3-3A gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • multicellular organism growth
  • cell proliferation
  • male gonad development
  • spermatid development
  • regulation of centromere complex assembly
  • single fertilization
  • nucleus organization
  • nucleosome assembly
  • embryo implantation
  • positive regulation of cell growth
  • oocyte maturation
  • telomeric heterochromatin assembly
  • centromeric heterochromatin assembly
  • muscle cell differentiation
  • osteoblast differentiation
  • telomere organization

Cellular Component

Where in the cell the gene product is active
  • Barr body
  • nucleus
  • chromosome, telomeric region
  • condensed chromosome inner kinetochore
  • extracellular vesicular exosome
  • macromolecular complex
  • nucleosome
  • extracellular region
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • structural constituent of chromatin
  • protein binding
  • protein heterodimerization activity
  • RNA polymerase II core promoter sequence-specific DNA binding
  • RNA polymerase II core promoter proximal region sequence-specific DNA binding
  • nucleosomal DNA binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.