ATXN7 Gene Summary [Human]

The autosomal dominant cerebellar ataxias (ADCA) are a heterogeneous group of neurodegenerative disorders characterized by progressive degeneration of the cerebellum, brain stem and spinal cord. Clinically, ADCA has been divided into three groups: ADCA types I-III. ADCAI is genetically heterogeneous, with five genetic loci, designated spinocerebellar ataxia (SCA) 1, 2, 3, 4 and 6, being assigned to five different chromosomes. ADCAII, which always presents with retinal degeneration (SCA7), and ADCAIII often referred to as the 'pure' cerebellar syndrome (SCA5), are most likely homogeneous disorders. Several SCA genes have been cloned and shown to contain CAG repeats in their coding regions. ADCA is caused by the expansion of the CAG repeats, producing an elongated polyglutamine tract in the corresponding protein. The expanded repeats are variable in size and unstable, usually increasing in size when transmitted to successive generations. This locus has been mapped to chromosome 3, and it has been determined that the diseased allele associated with spinocerebellar ataxia-7 contains 37-306 CAG repeats (near the N-terminus), compared to 4-35 in the normal allele. The encoded protein is a component of the SPT3/TAF9/GCN5 acetyltransferase (STAGA) and TBP-free TAF-containing (TFTC) chromatin remodeling complexes, and it thus plays a role in transcriptional regulation. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2016]

Details

Type
Processed Transcript
Official Symbol
ATXN7
Official Name
ataxin 7 [Source:HGNC Symbol;Acc:HGNC:10560]
Ensembl ID
ENSG00000163635
Bio databases IDs NCBI: 6314 Ensembl: ENSG00000163635
Aliases ataxin 7, Autosomal dominant cerebellar ataxia with retinal degeneration, SAGA associated factor 73 kDa homolog (S. cerevisiae)
Synonyms A430107N12RIK, ADCAII, ATAXIN-7, OPCA3, RGD1562692, SCA7, SGF73
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human ATXN7 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • SCA7, zinc-binding domain
  • nuclear export signal
  • polyglutamine repeat
  • glutamine repeat domain
  • chromatin binding
  • protein binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neurodegeneration
  • non-insulin-dependent diabetes mellitus
  • schizophrenia
  • ataxia
  • spinocerebellar ataxia type 7
  • diabetes mellitus
  • diabetic nephropathy
  • breast carcinoma
  • early missed abortion
  • motor dysfunction
regulated by
regulates
role in cell
  • expression in
  • quantity
  • cell death
  • binding in
  • organization
  • formation
  • inhibition in
  • degeneration
  • aggregation in
  • dysfunction

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • microtubule cytoskeleton
  • Cytoplasm
  • cytosol
  • nucleoplasm

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human ATXN7 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • positive regulation of transcription, DNA-dependent
  • regulation of RNA splicing
  • regulation of DNA repair
  • negative regulation of microtubule depolymerization
  • microtubule cytoskeleton organization
  • visual perception
  • nucleus organization
  • regulation of transcription from RNA polymerase II promoter

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • microtubule cytoskeleton
  • transcription factor TFTC complex
  • cytosol
  • nuclear matrix
  • nucleolus
  • SAGA complex
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • protein binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.