PITX2 Gene Summary [Human]

This gene encodes a member of the RIEG/PITX homeobox family, which is in the bicoid class of homeodomain proteins. The encoded protein acts as a transcription factor and regulates procollagen lysyl hydroxylase gene expression. This protein plays a role in the terminal differentiation of somatotroph and lactotroph cell phenotypes, is involved in the development of the eye, tooth and abdominal organs, and acts as a transcriptional regulator involved in basal and hormone-regulated activity of prolactin. Mutations in this gene are associated with Axenfeld-Rieger syndrome, iridogoniodysgenesis syndrome, and sporadic cases of Peters anomaly. A similar protein in other vertebrates is involved in the determination of left-right asymmetry during development. Alternatively spliced transcript variants encoding distinct isoforms have been described. [provided by RefSeq, Jul 2008]

Details

Type
Processed Transcript
Official Symbol
PITX2
Official Name
paired like homeodomain 2 [Source:HGNC Symbol;Acc:HGNC:9005]
Ensembl ID
ENSG00000164093
Bio databases IDs NCBI: 5308 Ensembl: ENSG00000164093
Aliases paired like homeodomain 2
Synonyms 9430085M16Rik, ARP1, ASGD4, Brx1, Brx1b, IDG2, IGDS, IGDS2, IHG2, IRID2, Munc30, Otlx2, paired-like homeodomain 2, paired-like homeodomain transcription factor 2, Pitx2c, PTX2, RGS, RIEG, RIEG1, RS
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human PITX2 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • RNA polymerase II transcription regulatory region sequence-specific binding transcriptional activator activity
  • OAR motif
  • transcription regulator
  • nucleic acid binding
  • phosphoprotein binding
  • transcription factor binding
  • chromatin binding
  • protein binding
  • sequence-specific DNA binding
  • identical protein binding
  • DNA binding
  • RNA polymerase II transcription factor activity, sequence-specific DNA binding
  • RNA polymerase II transcription regulatory region sequence-specific binding transcriptional repressor activity
  • double-stranded DNA binding
  • ribonucleoprotein binding
  • protein homodimerization
  • homeodomain
  • transcription factor activity

Pathways

Biological processes and signaling networks where the PITX2 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • atrial fibrillation
  • atrial flutter
  • Axenfeld-Rieger syndrome type 1
  • omphalocele
  • anterior segment dysgenesis
  • Axenfeld-Rieger syndrome
  • microphthalmia
  • right pulmonary isomerism
  • double outlet right ventricle
  • cataract disease
regulates
role in cell
  • proliferation
  • expression in
  • apoptosis
  • transcription in
  • cell viability
  • activation in
  • adhesion
  • binding in
  • cell spreading
  • quantity

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • Cytoplasm
  • nucleoplasm
  • Cajal bodies
  • myonuclei
  • chromatin

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human PITX2 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • embryonic heart tube left/right pattern formation
  • deltoid tuberosity development
  • positive regulation of cell proliferation
  • outflow tract morphogenesis
  • spleen development
  • anatomical structure morphogenesis
  • odontogenesis
  • cardiac neural crest cell migration involved in outflow tract morphogenesis
  • positive regulation of transcription from RNA polymerase II promoter
  • somatotropin secreting cell differentiation
  • determination of left/right symmetry
  • prolactin secreting cell differentiation
  • regulation of transcription from RNA polymerase II promoter
  • camera-type eye development
  • iris morphogenesis
  • left/right axis specification
  • hair cell differentiation

Cellular Component

Where in the cell the gene product is active
  • transcription factor complex
  • nucleus
  • cytoplasm
  • chromatin
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • sequence-specific DNA binding transcription factor activity
  • protein binding
  • RNA polymerase II core promoter proximal region sequence-specific DNA binding
  • transcription regulatory region sequence-specific DNA binding
  • sequence-specific DNA binding RNA polymerase II transcription factor activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.