SMARCD3 Gene Summary [Human]

The protein encoded by this gene is a member of the SWI/SNF family of proteins, whose members display helicase and ATPase activities and which are thought to regulate transcription of certain genes by altering the chromatin structure around those genes. The encoded protein is part of the large ATP-dependent chromatin remodeling complex SNF/SWI and has sequence similarity to the yeast Swp73 protein. Multiple alternatively spliced transcript variants have been found for this gene, but the biological validity of some variants has not been determined. [provided by RefSeq, Jul 2008]

Details

Type
Processed Transcript
Official Symbol
SMARCD3
Official Name
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:HGNC Symbol;Acc:HGNC:11108]
Ensembl ID
ENSG00000082014
Bio databases IDs NCBI: 6604 Ensembl: ENSG00000082014
Aliases SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, mammalian chromatin remodeling complex BRG1-associated factor 60C, Swp73-like protein, SWI/SNF complex 60 kDa subunit C, 60kDa BRG-1/Brm associated factor subunit c
Synonyms 1500001J14Rik, 2210409C08RIK, BAF60C, CRACD3, Rsc6p, SWI/SNF related BAF chromatin remodeling complex subunit D3
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human SMARCD3 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • SWIB/MDM2 domain
  • transcription regulator
  • ligand-dependent nuclear receptor interactor
  • LXXLL motif
  • transcription co-activator
  • transcription factor binding
  • chromatin binding
  • protein binding
  • receptor binding
  • SWIB/MDM2 domain family
  • SWI complex, BAF60b domains

Pathways

Biological processes and signaling networks where the SMARCD3 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • insulin resistance
  • prostate cancer
  • allergic rhinitis
  • plasma cell myeloma
  • impaired glucose tolerance
  • bleeding
  • androgenic alopecia
  • ventricular septal defect
  • prostatic intraepithelial neoplasm
  • prostatic intraepithelial neoplasia
regulated by
regulates
role in cell
  • expression in
  • survival
  • activation in
  • quantity
  • proliferation
  • abnormal morphology
  • differentiation
  • disassembly
  • accumulation in
  • non-homologous end joining in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • Cytoplasm
  • nucleoplasm
  • chromatin

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human SMARCD3 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • regulation of mitotic metaphase/anaphase transition
  • nervous system development
  • positive regulation of neuroblast proliferation
  • positive regulation of cell differentiation
  • positive regulation of myoblast differentiation
  • regulation of nucleotide-excision repair
  • nucleosome disassembly
  • regulation of transcription from RNA polymerase II promoter
  • secondary heart field specification
  • chromatin remodeling
  • positive regulation of transcription, DNA-dependent
  • cardiac right ventricle formation
  • neural retina development
  • positive regulation of smooth muscle cell differentiation
  • positive regulation of T cell differentiation
  • muscle cell differentiation
  • regulation of G1/S transition of mitotic cell cycle
  • positive regulation of double-strand break repair
  • regulation of G0 to G1 transition
  • positive regulation of G2/M transition of mitotic cell cycle

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • SWI/SNF complex
  • npBAF complex
  • nBAF complex
  • brahma complex
  • chromatin
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • transcription cofactor binding
  • ligand-dependent nuclear receptor binding
  • transcription cofactor activity
  • transcription coactivator activity
  • chromatin binding
  • receptor binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.