SNAPC4 Gene Summary [Human]

This gene encodes the largest subunit of the small nuclear RNA-activating protein (SNAP) complex. The encoded protein contains a Myb DNA-binding domain, and is essential for RNA polymerase II and III polymerase transcription from small nuclear RNA promoters. A mutation in this gene is associated with ankylosing spondylitis. [provided by RefSeq, Jul 2016]

Details

Type
Protein Coding
Official Symbol
SNAPC4
Official Name
small nuclear RNA activating complex polypeptide 4 [Source:HGNC Symbol;Acc:HGNC:11137]
Ensembl ID
ENSG00000165684
Bio databases IDs NCBI: 6621 Ensembl: ENSG00000165684
Aliases small nuclear RNA activating complex polypeptide 4
Synonyms 5730436L13RIK, NEDRSO, PTFalpha, small nuclear RNA activating complex polypeptide 4, small nuclear RNA activating complex, polypeptide 4, SNAP190
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human SNAPC4 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • SANT
  • Family of unknown function (DUF5585)
  • transcription regulator
  • SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
  • Myb-like DNA-binding domain
  • protein binding
  • general RNA polymerase II transcription factor
  • DNA binding
  • Myb repeat

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neurodevelopmental disorder with motor regression, progressive spastic paraplegia, and oromotor dysfunction
  • Crohn disease
  • ulcerative colitis
  • inflammatory bowel disease
regulated by
regulates

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • nucleoplasm

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human SNAPC4 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • snRNA transcription from RNA polymerase II promoter
  • snRNA transcription from RNA polymerase III promoter

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • snRNA-activating protein complex
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • DNA binding
  • general RNA polymerase II transcription factor activity
  • RNA polymerase II core promoter proximal region sequence-specific DNA binding
  • RNA polymerase III type 3 promoter sequence-specific DNA binding
  • core RNA polymerase III binding transcription factor activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.