SPTBN2 Gene Summary [Human]

Spectrins are principle components of a cell's membrane-cytoskeleton and are composed of two alpha and two beta spectrin subunits. The protein encoded by this gene (SPTBN2), is called spectrin beta non-erythrocytic 2 or beta-III spectrin. It is related to, but distinct from, the beta-II spectrin gene which is also known as spectrin beta non-erythrocytic 1 (SPTBN1). SPTBN2 regulates the glutamate signaling pathway by stabilizing the glutamate transporter EAAT4 at the surface of the plasma membrane. Mutations in this gene cause a form of spinocerebellar ataxia, SCA5, that is characterized by neurodegeneration, progressive locomotor incoordination, dysarthria, and uncoordinated eye movements. [provided by RefSeq, Dec 2009]

Details

Type
Protein Coding
Official Symbol
SPTBN2
Official Name
spectrin beta, non-erythrocytic 2 [Source:HGNC Symbol;Acc:HGNC:11276]
Ensembl ID
ENSG00000173898
Bio databases IDs NCBI: 6712 Ensembl: ENSG00000173898
Aliases spectrin beta, non-erythrocytic 2
Synonyms beta 3 SPECTRIN, beta III Spectrin, GTRAP41, LOC105369445, SCA5, SCAR14, Spectrin beta III, spectrin beta, non-erythrocytic 2, spectrin, beta, non-erythrocytic 2, Spectrin β III, spectrin β, non-erythrocytic 2, spectrin, β, non-erythrocytic 2, SPNB3, β 3 SPECTRIN, β III Spectrin
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human SPTBN2 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Mitotic checkpoint protein
  • SPEC
  • exonuclease SbcC
  • Calponin homology domain
  • membrane-association domain
  • protein binding
  • Pleckstrin homology-like domain
  • chromosome segregation protein SMC, common bacterial type
  • Spectrin repeats
  • actin-binding domain
  • structural constituent of cytoskeleton
  • actin binding
  • Spectrin repeat
  • PH domain
  • calponin homology (CH) domain superfamily
  • structural molecule
  • golgi targeting sequence

Pathways

Biological processes and signaling networks where the SPTBN2 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • rectum cancer
  • colorectal cancer
  • ataxia
  • spinocerebellar ataxia type 5
  • major depression
  • autosomal recessive spinocerebellar ataxia type 14
  • osteoarthritis
  • hereditary disorder
  • opioid dependence
  • breast carcinoma
regulated by
  • candesartan
  • SPTAN1
  • CERS6-AS1
  • methylprednisolone
  • zafirlukast
  • vorapaxar
  • KCNJ2
  • abamectin
  • montelukast
  • F Actin
regulates
role in cell
  • quantity
  • accumulation in
  • cell viability
  • density
  • migration
  • binding in
  • assembly
  • diameter
  • erastin sensitivity
  • swelling

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • soluble fraction
  • Golgi-enriched fraction
  • membrane fraction
  • glutaminergic synapse
  • intracellular membrane-bounded organelle
  • cytoskeleton
  • presynaptic regions
  • cell surface
  • perinuclear region
  • Nucleus
  • Plasma Membrane
  • endosomes
  • vesicles
  • Golgi Apparatus
  • cytosol
  • endoplasmic reticulum membrane
  • apical membrane
  • lateral plasma membrane
  • Golgi membrane
  • trans face of the Golgi apparatus
  • nucleoli
  • nuclear scaffolds
  • nuclear matrix
  • dendritic spines
  • dendritic spine neck
  • synaptic vesicles
  • paranodal junctions
  • dendritic trees
  • photoreceptor inner segments
  • I band
  • perikaryon
  • dendrites
  • excitatory synapses
  • dendritic shafts

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human SPTBN2 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • multicellular organism growth
  • synapse assembly
  • cerebellar Purkinje cell layer morphogenesis
  • vesicle-mediated transport
  • actin filament capping
  • actin cytoskeleton organization
  • adult behavior

Cellular Component

Where in the cell the gene product is active
  • extracellular space
  • paranodal junction
  • intracellular membrane-bounded organelle
  • cell junction
  • cytosol
  • neuronal cell body
  • cell projection
  • spectrin
  • plasma membrane
  • cortical actin cytoskeleton
  • apical plasma membrane

Molecular Function

What the gene product does at the molecular level
  • actin filament binding
  • actin binding
  • cadherin binding
  • structural constituent of cytoskeleton
  • phospholipid binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.