NCAM1 Gene Summary [Human]

This gene encodes a cell adhesion protein which is a member of the immunoglobulin superfamily. The encoded protein is involved in cell-to-cell interactions as well as cell-matrix interactions during development and differentiation. The encoded protein plays a role in the development of the nervous system by regulating neurogenesis, neurite outgrowth, and cell migration. This protein is also involved in the expansion of T lymphocytes, B lymphocytes and natural killer (NK) cells which play an important role in immune surveillance. This protein plays a role in signal transduction by interacting with fibroblast growth factor receptors, N-cadherin and other components of the extracellular matrix and by triggering signalling cascades involving FYN-focal adhesion kinase (FAK), mitogen-activated protein kinase (MAPK), and phosphatidylinositol 3-kinase (PI3K). One prominent isoform of this gene, cell surface molecule CD56, plays a role in several myeloproliferative disorders such as acute myeloid leukemia and differential expression of this gene is associated with differential disease progression. For example, increased expression of CD56 is correlated with lower survival in acute myeloid leukemia patients whereas increased severity of COVID-19 is correlated with decreased abundance of CD56-expressing NK cells in peripheral blood. Alternative splicing results in multiple transcript variants encoding distinct protein isoforms. [provided by RefSeq, Aug 2020]

Details

Type
Protein Coding
Official Symbol
NCAM1
Official Name
neural cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:7656]
Ensembl ID
ENSG00000149294
Bio databases IDs NCBI: 4684 Ensembl: ENSG00000149294
Aliases neural cell adhesion molecule 1
Synonyms Apha-1 NCAM, CD56, E-NCAM, MSK39, N-CAM, NCAM-C, neural cell adhesion molecule 1
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human NCAM1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • extracellular domain
  • palmitoylation site
  • Immunoglobulin C1-set domain
  • LRR-domain binding
  • immunoglobulin domain
  • Immunoglobulin I-set domain
  • Fibronectin type 3 domain
  • fibroblast growth factor receptor binding
  • protein binding
  • homophilic binding domain
  • cytoskeletal protein binding
  • cytoplasmic domain
  • FN3
  • Immunoglobulin like
  • intracellular domain
  • Immunoglobulin V-set domain
  • phosphatase binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • epithelial cancer
  • adenoma formation
  • colorectal cancer
  • pain
  • metastasis
  • covid-19 death
  • liver cancer
  • major depression
  • non-insulin-dependent diabetes mellitus
regulated by
regulates
role in cell
  • phosphorylation in
  • expression in
  • quantity
  • number
  • proliferation
  • apoptosis
  • differentiation
  • growth
  • migration
  • formation

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • myelin enriched fraction
  • raft fractions
  • membrane fraction
  • glutaminergic synapse
  • Cytoplasm
  • presynaptic regions
  • cell surface
  • cellular membrane
  • intercellular junctions
  • cell-cell contacts
  • cytosol
  • plasma membrane extracellular face
  • microdomains
  • presynaptic membrane
  • postsynaptic membrane
  • Golgi membrane
  • neuromuscular junctions
  • growth cone
  • neurites
  • synapse
  • intercalated disks
  • sarcolemma
  • dense-core vesicles
  • extracellular matrix
  • basal lamina
  • membrane rafts
  • membrane processes
  • perikaryon
  • axons
  • dendrites
  • postsynaptic density
  • axon terminals
  • exosomes
  • plasma
  • perivascular matrix

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human NCAM1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • viral entry into host cell
  • regulation of semaphorin-plexin signaling pathway
  • epithelial to mesenchymal transition
  • cell adhesion
  • commissural neuron axon guidance

Cellular Component

Where in the cell the gene product is active
  • membrane
  • external side of plasma membrane
  • cytosol
  • Golgi membrane
  • extracellular region
  • plasma membrane
  • cell surface

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • viral receptor activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.