SNRPE Gene Summary [Human]

The protein encoded by this gene is a core component of U small nuclear ribonucleoproteins, which are key components of the pre-mRNA processing spliceosome. The encoded protein plays a role in the 3' end processing of histone transcripts. This protein is one of the targets in the autoimmune disease systemic lupus erythematosus, and mutations in this gene have been associated with hypotrichosis. Several pseudogenes of this gene have been identified. [provided by RefSeq, Jun 2016]

Details

Type
Protein Coding
Official Symbol
SNRPE
Official Name
small nuclear ribonucleoprotein polypeptide E [Source:HGNC Symbol;Acc:HGNC:11161]
Ensembl ID
ENSG00000182004
Bio databases IDs NCBI: 6635 Ensembl: ENSG00000182004
Aliases small nuclear ribonucleoprotein polypeptide E
Synonyms HYPT11, small nuclear ribonucleoprotein E, small nuclear ribonucleoprotein polypeptide E, SME, Sm protein E, snRNP-E
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human SNRPE often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Sm and related proteins
  • ribonucleoprotein binding
  • protein binding

Pathways

Biological processes and signaling networks where the SNRPE gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • non-small cell lung cancer
  • epithelial cancer
  • hypotrichosis type 11
  • hepatocellular carcinoma
  • liver cancer
  • chronic kidney disease
regulated by
  • streptozocin
  • bisphenol A
  • 5-fluorouracil
  • Major late
  • imatinib
  • tretinoin
  • CRYBA1
  • RNase
  • phenylephrine
  • tanespimycin
role in cell
  • cell death
  • apoptosis
  • expression in
  • cell viability
  • migration
  • quantity
  • proliferation
  • splicing by
  • invasion by
  • accumulation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • catalytic step 2 spliceosome
  • cytosol
  • spliceosomes
  • nucleoplasm
  • interchromatin granule clusters

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human SNRPE gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • spliceosomal complex assembly
  • spliceosomal snRNP assembly
  • nuclear mRNA splicing, via spliceosome

Cellular Component

Where in the cell the gene product is active
  • U5 snRNP
  • spliceosomal complex
  • U2-type spliceosomal complex
  • U7 snRNP
  • U2 snRNP
  • telomerase holoenzyme complex
  • U1 snRNP
  • U4 snRNP
  • nucleoplasm
  • U12-type spliceosomal complex
  • nucleus
  • pICln-Sm protein complex
  • catalytic step 2 spliceosome
  • precatalytic spliceosome
  • methylosome
  • SMN-Sm protein complex
  • U4/U6 x U5 tri-snRNP complex
  • cytosol
  • U2-type catalytic step 2 spliceosome
  • U2-type precatalytic spliceosome
  • small nuclear ribonucleoprotein complex

Molecular Function

What the gene product does at the molecular level
  • RNA binding
  • protein binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.