MAP1LC3A Gene Summary [Human]

MAP1A and MAP1B are microtubule-associated proteins which mediate the physical interactions between microtubules and components of the cytoskeleton. MAP1A and MAP1B each consist of a heavy chain subunit and multiple light chain subunits. The protein encoded by this gene is one of the light chain subunits and can associate with either MAP1A or MAP1B. Two transcript variants encoding different isoforms have been found for this gene. The expression of variant 1 is suppressed in many tumor cell lines, suggesting that may be involved in carcinogenesis. [provided by RefSeq, Feb 2012]

Details

Type
Protein Coding
Official Symbol
MAP1LC3A
Official Name
microtubule associated protein 1 light chain 3 alpha [Source:HGNC Symbol;Acc:HGNC:6838]
Ensembl ID
ENSG00000101460
Bio databases IDs NCBI: 84557 Ensembl: ENSG00000101460
Aliases microtubule associated protein 1 light chain 3 alpha
Synonyms 1010001H21Rik, 4922501H04Rik, ATG8E, LC3, LC3A, LC3-I, LC3-II, MAP1ALC3, MAP1BLC3, MAP LC3, microtubule-associated protein 1 light chain 3 alpha, microtubule-associated protein 1 light chain 3 α
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human MAP1LC3A often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • phospholipid binding
  • microtubule binding
  • ubiquitin protein ligase binding
  • Ubl1_cv_Nsp3_N-like
  • alpha helix
  • protein binding

Pathways

Biological processes and signaling networks where the MAP1LC3A gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • osteoarthritis
regulated by
  • TGFB1
  • D-glucose
  • thapsigargin
  • Influenza A virus (A/WSN/1933(H1N1))
  • NPC2
  • teriflunomide
  • streptozocin
  • RNASEL
  • ATG5
  • methotrexate
regulates
role in cell
  • size
  • quantity
  • apoptosis
  • accumulation in
  • growth
  • replication in
  • production in
  • response
  • degradation in
  • assembly

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • soluble fraction
  • glutaminergic synapse
  • microtubule cytoskeleton
  • double-membrane vesicle
  • intracellular membrane-bounded organelle
  • cellular membrane
  • cytosol
  • synapse
  • autophagic vacuoles
  • late endosomes
  • autolysosomes
  • autophagosomes

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human MAP1LC3A gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • p38MAPK cascade
  • cellular response to amino acid starvation
  • response to iron(II) ion
  • SMAD protein signal transduction
  • JNK cascade
  • cellular response to starvation
  • cellular response to copper ion
  • mitochondrion degradation
  • cellular response to nitrogen starvation
  • autophagic vacuole assembly
  • cellular response to hydrogen peroxide
  • response to lead ion
  • macroautophagy

Cellular Component

Where in the cell the gene product is active
  • intracellular membrane-bounded organelle
  • late endosome
  • cytosol
  • organelle membrane
  • autophagic vacuole
  • autophagic vacuole membrane
  • microtubule

Molecular Function

What the gene product does at the molecular level
  • phosphatidylethanolamine binding
  • ubiquitin protein ligase binding
  • protein binding
  • phospholipid binding
  • microtubule binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.