Srsf1 Gene Summary [Mouse]

The protein encoded by this gene is a member of the serine/arginine (SR)-rich family of pre-mRNA splicing factors, which constitute part of the spliceosome. Each of these factors contains an RNA recognition motif (RRM) for binding RNA and an RS domain for binding other proteins. The RS domain is rich in serine and arginine residues and facilitates interaction between different SR splicing factors. In addition to being critical for mRNA splicing, the SR proteins have also been shown to be involved in mRNA export from the nucleus and in translation. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2010]

Details

Type
Protein Coding
Official Symbol
Srsf1
Official Name
serine and arginine-rich splicing factor 1 [Source:MGI Symbol;Acc:MGI:98283]
Ensembl ID
ENSMUSG00000018379
Bio databases IDs NCBI: 110809 Ensembl: ENSMUSG00000018379
Aliases serine and arginine-rich splicing factor 1
Synonyms 1110054N12Rik, 5730507C05RIK, 6330415C05Rik, ASF, ASF/SF2, FLJ44342, LOC102554532, LOC124907953, LOC688114, NEDFBA, RP11 159D125, serine and arginine-rich splicing factor 1, SF2, SF2/ASF, SF2p33, SFRS1, SRp30a
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Srsf1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • arginine serine dipeptide repeat domain
  • RNA recognition motif (RRM) superfamily
  • RS domain binding
  • protein kinase binding
  • RNA recognition motif
  • mRNA binding
  • enzyme binding
  • Occluded RNA-recognition motif
  • protein binding
  • SR domain
  • RNA-binding domain
  • RNA binding

Pathways

Biological processes and signaling networks where the Srsf1 gene in mouse plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • epithelial cancer
  • epithelial neoplasia
  • cancer
  • neurodevelopmental disorder with dysmorphic facies and behavioral abnormalities
  • hereditary disorder
  • non-small cell lung cancer
  • lung cancer
  • pituitary gland adenoma
  • adenoma formation
regulated by
  • cyclosporin A
  • lipopolysaccharide
  • beta-estradiol
  • CTNNB1
  • SRPK1/2
  • tozasertib
  • SRPK1
  • REV
  • EGFR
  • trichostatin A
regulates
role in cell
  • cell death
  • apoptosis
  • production in
  • quantity
  • expression in
  • proliferation
  • binding in
  • damage in
  • phosphorylation in
  • morphology

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • catalytic step 2 spliceosome
  • Cytoplasm
  • spliceosomes
  • nuclear foci
  • nucleoplasm
  • nucleoli
  • interchromatin granule clusters
  • nuclear envelope
  • nuclear speckles
  • chromatin
  • cytosolic fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Srsf1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • oligodendrocyte differentiation
  • nuclear mRNA 5'-splice site recognition
  • alternative nuclear mRNA splicing, via spliceosome
  • regulation of RNA splicing
  • positive regulation of RNA splicing
  • mRNA splice site selection
  • mRNA processing
  • mRNA transport
  • nuclear mRNA splicing, via spliceosome

Cellular Component

Where in the cell the gene product is active
  • nuclear envelope
  • nucleus
  • exon-exon junction complex
  • catalytic step 2 spliceosome
  • cytoplasm
  • nuclear speck
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • RNA binding
  • protein binding
  • mRNA binding
  • protein kinase B binding
  • DNA topoisomerase binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.