Snai1 Gene Summary [Mouse]

Enables DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in several processes, including epithelial to mesenchymal transition involved in endocardial cushion formation; heterochromatin organization; and regulation of DNA-templated transcription. Acts upstream of or within several processes, including hair follicle morphogenesis; negative regulation of cell differentiation involved in embryonic placenta development; and trophoblast giant cell differentiation. Located in cytoplasm; nucleus; and pericentric heterochromatin. Is expressed in several structures, including central nervous system; early conceptus; embryo mesenchyme; genitourinary system; and sensory organ. Used to study dilated cardiomyopathy and skin cancer. Orthologous to human SNAI1 (snail family transcriptional repressor 1). [provided by Alliance of Genome Resources, Jul 2025]

Details

Type
Protein Coding
Official Symbol
Snai1
Official Name
snail family zinc finger 1 [Source:MGI Symbol;Acc:MGI:98330]
Ensembl ID
ENSMUSG00000042821
Bio databases IDs NCBI: 20613 Ensembl: ENSMUSG00000042821
Aliases snail family zinc finger 1
Synonyms AI194338, dJ710H13.1, SLUGH2, SNA, Sna1, SNAH, SNAIL, SNAIL1, snail family transcriptional repressor 1, snail family zinc finger 1
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Snai1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Zinc finger, C2H2 type
  • 14-3-3 binding domain
  • beta-catenin with a destruction motif
  • transcription regulator
  • GSK3 beta phosphorylation site
  • nucleic acid binding
  • TrCP binding domain
  • SNAG domain
  • protein binding
  • sequence-specific DNA binding
  • RNA polymerase II transcription regulatory region sequence-specific binding transcriptional repressor activity
  • kinase binding
  • double-stranded DNA binding
  • Zinc-finger double domain
  • zinc finger domain

Pathways

Biological processes and signaling networks where the Snai1 gene in mouse plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • metastasis
  • acute myeloid leukemia
  • advanced cancer
  • cancer
  • cardiac fibrosis
  • renal fibrosis
  • breast cancer
  • organismal death
  • non-small cell lung cancer
regulated by
  • IL1B
  • N-acetyl-L-cysteine
  • CAMP
  • cycloheximide
  • dexamethasone
  • lipopolysaccharide
  • prostaglandin E2
  • PD98059
  • PEBP1
  • Immunoglobulin
regulates
role in cell
  • apoptosis
  • activation in
  • proliferation
  • phosphorylation in
  • migration
  • expression in
  • growth
  • activation
  • accumulation in
  • quantity

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • fibrillar center
  • intracellular membrane-bounded organelle
  • Cytoplasm
  • cytosol
  • nucleoplasm
  • perinuclear space
  • centromeres
  • pericentric heterochromatin

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Snai1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • heterochromatin organization
  • negative regulation of DNA damage response, signal transduction by p53 class mediator
  • aortic valve morphogenesis
  • palate development
  • cartilage morphogenesis
  • regulation of transcription, DNA-dependent
  • epithelial to mesenchymal transition involved in endocardial cushion formation
  • left/right pattern formation
  • positive regulation of epithelial to mesenchymal transition
  • negative regulation of transcription from RNA polymerase II promoter
  • Notch signaling pathway
  • positive regulation of transcription, DNA-dependent
  • trophoblast giant cell differentiation
  • negative regulation of cell differentiation involved in embryonic placenta development
  • negative regulation of vitamin D biosynthetic process
  • osteoblast differentiation
  • hair follicle morphogenesis
  • epithelial to mesenchymal transition
  • canonical Wnt receptor signaling pathway
  • regulation of tight junction assembly
  • mesoderm formation
  • epithelial cell migration
  • positive regulation of cell migration

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • cytoplasm
  • intracellular membrane-bounded organelle
  • cytosol
  • centromeric heterochromatin
  • fibrillar center
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • metal ion binding
  • RNA polymerase II core promoter proximal region sequence-specific DNA binding
  • RNA polymerase II regulatory region sequence-specific DNA binding
  • RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
  • kinase binding
  • E-box binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.