Smpdl3a Gene Summary [Rat]

Enables phosphoric diester hydrolase activity and zinc ion binding activity. Involved in nucleoside triphosphate catabolic process. Located in extracellular space. [provided by Alliance of Genome Resources, Apr 2022]

Details

Type
Protein Coding
Official Symbol
Smpdl3a
Official Name
sphingomyelin phosphodiesterase, acid-like 3A [Source:RGD Symbol;Acc:1359277]
Ensembl ID
ENSRNOG00000000815
Bio databases IDs NCBI: 294422 Ensembl: ENSRNOG00000000815
Aliases sphingomyelin phosphodiesterase, acid-like 3A
Synonyms 0610010C24Rik, ASM3A, ASML3, ASML3A, Asm Like Phosphodiesterase 3a, sphingomyelin phosphodiesterase acid like 3A, sphingomyelin phosphodiesterase, acid-like 3A, yR36GH4.1
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Smpdl3a often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Acid sphingomyelin phosphodiesterase C-terminal region
  • zinc ion binding
  • enzyme
  • protein binding
  • metallophosphatase superfamily, metallophosphatase domain
  • phosphoric diester hydrolase

Pathways

Biological processes and signaling networks where the Smpdl3a gene in rat plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • colorectal cancer
  • colorectal adenoma
  • colorectal adenoma formation
regulated by
regulates
  • IL6
  • nucleoside triphosphate

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Extracellular Space

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Smpdl3a gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • nucleoside triphosphate catabolic process
  • sphingomyelin catabolic process

Cellular Component

Where in the cell the gene product is active
  • extracellular space
  • extracellular vesicular exosome

Molecular Function

What the gene product does at the molecular level
  • ATPase activity
  • zinc ion binding
  • protein binding
  • sphingomyelin phosphodiesterase activity
  • phosphoric diester hydrolase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.