Sbds Gene Summary [Rat]
Predicted to enable microtubule binding activity; rRNA binding activity; and ribosome binding activity. Predicted to be involved in several processes, including bone marrow development; bone mineralization; and ribosome biogenesis. Predicted to act upstream of or within inner cell mass cell proliferation. Predicted to be located in cytosol; nuclear lumen; and spindle pole. Human ortholog(s) of this gene implicated in Shwachman-Diamond syndrome and aplastic anemia. Orthologous to human SBDS (SBDS ribosome maturation factor). [provided by Alliance of Genome Resources, Jul 2025]
Details
| Type | Protein Coding |
| Official Symbol | Sbds |
| Official Name | SBDS, ribosome maturation factor [Source:RGD Symbol;Acc:1311043] |
| Ensembl ID | ENSRNOG00000000888 |
| Bio databases IDs | |
| Aliases | SBDS, ribosome maturation factor |
| Synonyms | 4733401P19Rik, CGI-97, SBDS ribosome maturation factor, Sbds, ribosome maturation factor, SDO1, SDS, Shwachman-bodian-diamond syndrome protein homolog, SWDS |
| Species | Rat, Rattus norvegicus |
| Orthologies |
Protein Domains
A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Sbds often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
- microtubule binding
- rRNA binding
- ribosome binding
- Shwachman-Bodian-Diamond syndrome (SBDS) protein
- rRNA metabolism protein, SBDS family
- protein binding
- SBDS protein, C-terminal domain
- SBDS protein, domain II
Top Findings
The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
- Shwachman-Diamond syndrome type 1
- aplastic anemia
- mental retardation
- hereditary disorder
- atopic dermatitis
- Shwachman syndrome
- myelodysplastic syndrome
regulated by
- testosterone
- rotenone
- DICER1
- BCYRN1
role in cell
- accumulation in
- expression in
- apoptosis
- production in
- binding in
- migration
- binding
- colony formation
- differentiation
- expansion
Subcellular Expression
Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
- Nucleus
- Cytoplasm
- cytosol
- nucleoplasm
- nucleoli
- spindle pole
- plasma
Gene Ontology Annotations
Describes the biological processes, cellular components, and molecular functions associated with the rat Sbds gene, providing context for its role in the cell.
Biological Process
Functions and activities the gene product is involved in
- bone mineralization
- inner cell mass cell proliferation
- mitotic spindle organization
- rRNA processing
- leukocyte chemotaxis
- mature ribosome assembly
- hemopoietic progenitor cell differentiation
- bone marrow development
Cellular Component
Where in the cell the gene product is active
- nucleus
- cytoplasm
- spindle pole
- cytosol
- nucleolus
- nucleoplasm
Molecular Function
What the gene product does at the molecular level
- RNA binding
- protein binding
- ribosome binding
- rRNA binding
- microtubule binding