Otud3 Gene Summary [Rat]

Predicted to enable cysteine-type deubiquitinase activity. Predicted to be involved in cellular response to nutrient levels; protein deubiquitination; and protein stabilization. Predicted to act upstream of or within negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction and protein deubiquitination. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Orthologous to human OTUD3 (OTU deubiquitinase 3). [provided by Alliance of Genome Resources, Apr 2025]

Details

Type
Protein Coding
Official Symbol
Otud3
Official Name
OTU deubiquitinase 3 [Source:RGD Symbol;Acc:1560468]
Ensembl ID
ENSRNOG00000017037
Bio databases IDs NCBI: 500572 Ensembl: ENSRNOG00000017037
Aliases OTU deubiquitinase 3
Synonyms 3110030K17RIK, DUBA4, OTU deubiquitinase 3, OTU domain containing 3, RGD1560468
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Otud3 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • ovarian tumor domain
  • peptidase
  • ubiquitin-specific protease
  • protein binding
  • OTU (ovarian tumor) domain family

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • cancer
  • organismal death
  • ulcerative colitis
  • inflammatory bowel disease
  • liver cancer
  • breast cancer
  • metastasis
  • advanced cancer
  • tumorigenesis
  • myelin oligodendrocyte glycoprotein induced experimental autoimmune encephalomyelitis
regulated by
regulates
role in cell
  • expression in
  • phosphorylation in
  • proliferation
  • growth
  • degradation in
  • ubiquitination in
  • binding in
  • deubiquitination in
  • polyubiquitination in
  • K48 polyubiquitination in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • Nucleus
  • cytosol

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Otud3 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • protein K11-linked deubiquitination
  • cellular response to nutrient levels
  • proteolysis
  • protein K6-linked deubiquitination
  • protein stabilization
  • protein K48-linked deubiquitination
  • negative regulation of protein kinase B signaling cascade

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • cytoplasm
  • cytosol

Molecular Function

What the gene product does at the molecular level
  • ubiquitin-specific protease activity
  • protein binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.