ARID4B Gene Summary [Human]

This gene encodes a protein with sequence similarity to retinoblastoma-binding protein-1. The encoded protein is a subunit of the histone deacetylase-dependant SIN3A transcriptional corepressor complex, which functions in diverse cellular processes including proliferation, differentiation, apoptosis, oncogenesis, and cell fate determination. The gene product is recognized by IgG antibody isolated from a breast cancer patient and appears to be a molecular marker associated with a broad range of human malignancies. Alternate transcriptional splice variants encoding different isoforms have been characterized. [provided by RefSeq, Jul 2008]

Details

Type
Nonsense Mediated Decay
Official Symbol
ARID4B
Official Name
AT-rich interaction domain 4B [Source:HGNC Symbol;Acc:HGNC:15550]
Ensembl ID
ENSG00000054267
Bio databases IDs NCBI: 51742 Ensembl: ENSG00000054267
Aliases AT-rich interaction domain 4B
Synonyms AT-rich interaction domain 4B, BCAA, BRCAA1, LOC100912163, RBBP1L1, RBP1L1, RBP1-LIKE, SAP180
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human ARID4B often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Chromatin organization modifier domain
  • transcription regulator
  • r1 domain
  • RBB1NT (NUC162) domain
  • PWWP (Pro-Trp-Trp-Pro) domain
  • protein binding
  • ARID/BRIGHT DNA binding domain
  • malignant brain tumor (MBT) repeat
  • DNA binding
  • R2 domain
  • CHROMO (CHRromatin Organization Modifier) domains and chromo shadow domains
  • Tudor domain superfamily
  • ARID/BRIGHT DNA binding domain family

Pathways

Biological processes and signaling networks where the ARID4B gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • cancer
  • leukemia
  • hemophagocytosis
  • psychosis
  • femoral fracture
  • agenesis
  • acute myeloid leukemia
  • hypogonadism
  • thrombocytopenia
  • asthma
regulated by
regulates
role in cell
  • number
  • migration
  • expression in
  • apoptosis
  • quantity
  • proliferation
  • development
  • organization
  • co-activation in
  • spermatogenesis

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • Cytoplasm
  • Mitochondria
  • cytosol
  • nucleoplasm
  • nucleoli

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human ARID4B gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • negative regulation of transcription from RNA polymerase II promoter
  • spermatogenesis
  • transcription from RNA polymerase II promoter
  • positive regulation of transcription from RNA polymerase II promoter
  • genetic imprinting
  • negative regulation of transforming growth factor beta receptor signaling pathway
  • negative regulation of cell migration
  • regulation of transcription from RNA polymerase II promoter

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • mitochondrion
  • cytosol
  • nucleoplasm
  • Sin3-type complex

Molecular Function

What the gene product does at the molecular level
  • DNA binding
  • protein binding
  • transcription regulatory region sequence-specific DNA binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.