RANBP2 Gene Summary [Human]

RAN is a small GTP-binding protein of the RAS superfamily that is associated with the nuclear membrane and is thought to control a variety of cellular functions through its interactions with other proteins. This gene encodes a very large RAN-binding protein that immunolocalizes to the nuclear pore complex. The protein is a giant scaffold and mosaic cyclophilin-related nucleoporin implicated in the Ran-GTPase cycle. The encoded protein directly interacts with the E2 enzyme UBC9 and strongly enhances SUMO1 transfer from UBC9 to the SUMO1 target SP100. These findings place sumoylation at the cytoplasmic filaments of the nuclear pore complex and suggest that, for some substrates, modification and nuclear import are linked events. This gene is partially duplicated in a gene cluster that lies in a hot spot for recombination on chromosome 2q. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
RANBP2
Official Name
RAN binding protein 2 [Source:HGNC Symbol;Acc:HGNC:9848]
Ensembl ID
ENSG00000153201
Bio databases IDs NCBI: 5903 Ensembl: ENSG00000153201
Aliases RAN binding protein 2, nucleoporin 358
Synonyms A430087B05Rik, ADANE, ANE1, IIAE3, LOC100911178, NUP358, RAN binding protein 2, RGD1560047, TRP1, TRP2
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human RANBP2 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • SUMO ligase
  • leucine rich domain
  • SUMO transferase activity
  • importin beta binding domain
  • cyclophilin
  • enzyme binding
  • enzyme
  • protein binding
  • Pleckstrin homology-like domain
  • RBH domain
  • Ran binding domain
  • FG repeat
  • binding protein
  • phenylalanine-glycine motif
  • Zn-finger in Ran binding protein and others
  • RANBP2 SUMO E3 ligase domain
  • Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
  • cyclophilin domain
  • Tetratricopeptide repeats
  • kinase activator
  • zinc finger domain
  • Nup358/RanBP2 E3 ligase domain
  • tetratricopeptide repeat
  • E3 ubiquitin ligase domain

Pathways

Biological processes and signaling networks where the RANBP2 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • infection by HIV-1
  • squamous-cell carcinoma
  • squamous cell cancer
  • susceptibility to infection-induced acute encephalopathy type 3
  • organismal death
  • attention deficit hyperactivity disorder
  • Leigh syndrome
regulated by
role in cell
  • phosphorylation in
  • expression in
  • accumulation in
  • cell death
  • growth
  • binding in
  • attachment
  • survival
  • migration
  • cell viability

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • interchromatin granule cluster fractions
  • intracellular membrane-bounded organelle
  • endomembrane system
  • Cytoplasm
  • perinuclear region
  • cytosol
  • nuclear foci
  • nuclear pores
  • nucleoplasm
  • nuclear rim
  • spindle pole
  • nuclear envelope
  • fibrils
  • kinetochores
  • plasma
  • detergent-soluble fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human RANBP2 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • centrosome localization
  • nucleocytoplasmic transport
  • nuclear export
  • response to amphetamine
  • protein sumoylation
  • NLS-bearing substrate import into nucleus
  • regulation of gluconeogenesis
  • protein folding
  • mRNA transport

Cellular Component

Where in the cell the gene product is active
  • nuclear envelope
  • nuclear inclusion body
  • nuclear membrane
  • cytoplasm
  • intracellular membrane-bounded organelle
  • membrane
  • cytosol
  • annulate lamellae
  • nucleoplasm
  • nuclear pore

Molecular Function

What the gene product does at the molecular level
  • cyclosporin A binding
  • peptidyl-prolyl cis-trans isomerase activity
  • RNA binding
  • protein binding
  • metal ion binding
  • GTPase activator activity
  • small GTPase binding
  • SUMO ligase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.