CNGB1 Gene Summary [Human]

In humans, the rod photoreceptor cGMP-gated cation channel helps regulate ion flow into the rod photoreceptor outer segment in response to light-induced alteration of the levels of intracellular cGMP. This channel consists of two subunits, alpha and beta, with the protein encoded by this gene representing the beta subunit. Defects in this gene are a cause of cause of retinitis pigmentosa type 45. Three transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2013]

Details

Type
Protein Coding
Official Symbol
CNGB1
Official Name
cyclic nucleotide gated channel subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:2151]
Ensembl ID
ENSG00000070729
Bio databases IDs NCBI: 1258 Ensembl: ENSG00000070729
Aliases cyclic nucleotide gated channel subunit beta 1, glutamic acid-rich protein, cyclic nucleotide-gated cation channel beta-1
Synonyms BC016201, CNCG2, CNCG3L, CNCG4, CNG-4, CNGB1B, CNG channel 4, Cng channel beta1b, cyclic nucleotide gated channel beta 1, cyclic nucleotide gated channel subunit beta 1, cyclic nucleotide gated channel subunit β 1, cyclic nucleotide gated channel β 1, GAR1, GARP, Garp2, Gm1959, RCNC2, RCNCb, RCNCbeta, RP45
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human CNGB1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Ion transport protein
  • intracellular cGMP activated cation channel
  • intracellular cAMP activated cation channel
  • protein binding
  • intracellular cyclic nucleotide activated cation channel
  • ion channel
  • Cyclic nucleotide-monophosphate binding domain
  • acidic cluster
  • Cyclic nucleotide-binding domain
  • binding protein
  • 3',5'-cAMP binding
  • ligand-gated ion channel
  • CAP_ED
  • 3',5'-cGMP binding

Pathways

Biological processes and signaling networks where the CNGB1 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • retinal dystrophy
  • retinitis pigmentosa type 45
  • retinitis pigmentosa
  • CNGB1-related retinopathy
  • peripheral neuropathy
  • amblyopia
  • autosomal recessive retinitis pigmentosa
  • experimentally-induced diabetes
  • MYCN amplification negative neuroblastoma
  • neuroblastoma formation
regulated by
regulates
role in cell
  • number
  • degeneration
  • function
  • abnormal morphology
  • electrophysiology
  • response
  • action potential
  • linkage in
  • maintenance
  • linkage

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • membrane fraction
  • cilia
  • cellular membrane
  • Golgi membrane
  • photoreceptor outer segments
  • perikaryon
  • axon terminals
  • rod outer segments
  • cytosolic fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human CNGB1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • detection of light stimulus involved in visual perception
  • cytosolic calcium ion homeostasis
  • visual perception
  • phototransduction
  • olfactory nerve maturation
  • potassium ion transport
  • sodium ion transport
  • retina homeostasis
  • cation transport
  • positive regulation of gene expression
  • photoreceptor cell maintenance
  • sensory perception of smell
  • calcium ion transport
  • calcium ion transmembrane transport
  • photoreceptor cell outer segment organization
  • detection of chemical stimulus involved in sensory perception of smell
  • sodium ion transmembrane transport
  • protein localization to organelle
  • membrane depolarization

Cellular Component

Where in the cell the gene product is active
  • intracellular cyclic nucleotide activated cation channel complex
  • terminal button
  • Golgi-associated vesicle membrane
  • cilium membrane
  • plasma membrane
  • photoreceptor outer segment

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • ligand-gated ion channel activity
  • calcium channel activity
  • sodium channel activity
  • cAMP binding
  • intracellular cAMP activated cation channel activity
  • cGMP binding
  • intracellular cGMP activated cation channel activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.