COL4A4 Gene Summary [Human]

This gene encodes one of the six subunits of type IV collagen, the major structural component of basement membranes. This particular collagen IV subunit, however, is only found in a subset of basement membranes. Like the other members of the type IV collagen gene family, this gene is organized in a head-to-head conformation with another type IV collagen gene so that each gene pair shares a common promoter. Mutations in this gene are associated with type II autosomal recessive Alport syndrome (hereditary glomerulonephropathy) and with familial benign hematuria (thin basement membrane disease). Two transcripts, differing only in their transcription start sites, have been identified for this gene and, as is common for collagen genes, multiple polyadenylation sites are found in the 3' UTR. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
COL4A4
Official Name
collagen type IV alpha 4 chain [Source:HGNC Symbol;Acc:HGNC:2206]
Ensembl ID
ENSG00000081052
Bio databases IDs NCBI: 1286 Ensembl: ENSG00000081052
Aliases collagen type IV alpha 4 chain, collagen of basement membrane, alpha-4 chain
Synonyms [a]4(IV), ATS2, BFH, BFH1, CA44, collagen type IV alpha 4, collagen, type IV, alpha 4, collagen type IV alpha 4 chain, collagen, type IV, α 4, collagen type IV α 4 chain, E130010M05RIK, Procollagen iv alpha4
Species
Human, Homo sapiens
OrthologiesMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human COL4A4 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • extracellular matrix structural constituent
  • Collagen triple helix repeat (20 copies)
  • C-terminal tandem repeated domain in type 4 procollagen

Pathways

Biological processes and signaling networks where the COL4A4 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • COVID-19
  • Alport syndrome
  • coronary artery disease
  • autosomal dominant Alport syndrome
  • autosomal recessive Alport syndrome
  • thin basement membrane disease
  • myocardial infarction
  • type II Alport syndrome
  • hereditary disorder
  • Dupuytren contracture
regulated by
role in cell
  • activation in
  • apoptosis
  • expansion
  • development
  • elongation
  • assembly
  • differentiation
  • expansion in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Extracellular Space
  • cell surface
  • endoplasmic reticulum lumen
  • basement membrane
  • glomerular basement membrane

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human COL4A4 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • glomerular basement membrane development

Cellular Component

Where in the cell the gene product is active
  • endoplasmic reticulum lumen
  • extracellular space
  • basement membrane
  • extracellular region
  • collagen type IV

Molecular Function

What the gene product does at the molecular level
  • extracellular matrix structural constituent conferring tensile strength
  • extracellular matrix structural constituent
  • binding, bridging

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.