NOP56 Gene Summary [Human]

Nop56p is a yeast nucleolar protein that is part of a complex with the nucleolar proteins Nop58p and fibrillarin. Nop56p is required for assembly of the 60S ribosomal subunit and is involved in pre-rRNA processing. The protein encoded by this gene is similar in sequence to Nop56p and is also found in the nucleolus. Expansion of a GGCCTG repeat from 3-8 copies to 1500-2500 copies in an intron of this gene results in spinocerebellar ataxia 36. Multiple transcript variants encoding several different isoforms have been found for this gene, but the full-length nature of most of them has not been determined. [provided by RefSeq, Jul 2016]

Details

Type
Protein Coding
Official Symbol
NOP56
Official Name
NOP56 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:15911]
Ensembl ID
ENSG00000101361
Bio databases IDs NCBI: 10528 Ensembl: ENSG00000101361
Aliases NOP56 ribonucleoprotein, spinocerebellar ataxia 36
Synonyms 2310044F10Rik, NOL5A, NOP56 ribonucleoprotein, SCA36
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human NOP56 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • NOP5NT (NUC127) domain
  • snoRNA binding domain, fibrillarin
  • enzyme binding
  • snoRNA binding
  • protein binding
  • NOSIC (NUC001) domain
  • RNA binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • gastric adenocarcinoma
  • gastric epithelial cancer
  • plexiform neurofibroma
  • spinocerebellar ataxia type 36
  • infection by vesicular stomatitis virus
regulated by
  • poly rI:rC-RNA
  • IL1B
  • MYC
  • Influenza A virus (A/Bangkok/RX73(H3N2))
  • beta-estradiol
  • RYR1
  • phytohemagglutinin
  • PD98059
  • MYCN
  • CEBPB
regulates
  • reactive oxygen species
role in cell
  • sirolimus sensitivity
  • processing in
  • everolimus sensitivity

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • interchromatin granule cluster fractions
  • fibrillar center
  • pre-ribosome
  • nucleoplasm
  • nucleoli

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human NOP56 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • ribosomal small subunit biogenesis
  • rRNA processing

Cellular Component

Where in the cell the gene product is active
  • box C/D snoRNP complex
  • small-subunit processome
  • cytoplasm
  • pre-snoRNP complex
  • membrane
  • nucleolus
  • small nucleolar ribonucleoprotein complex
  • fibrillar center
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • snoRNA binding
  • RNA binding
  • cadherin binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.