HOXA5 Gene Summary [Human]

In vertebrates, the genes encoding the class of transcription factors called homeobox genes are found in clusters named A, B, C, and D on four separate chromosomes. Expression of these proteins is spatially and temporally regulated during embryonic development. This gene is part of the A cluster on chromosome 7 and encodes a DNA-binding transcription factor which may regulate gene expression, morphogenesis, and differentiation. Methylation of this gene may result in the loss of its expression and, since the encoded protein upregulates the tumor suppressor p53, this protein may play an important role in tumorigenesis. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
HOXA5
Official Name
homeobox A5 [Source:HGNC Symbol;Acc:HGNC:5106]
Ensembl ID
ENSG00000106004
Bio databases IDs NCBI: 3202 Ensembl: ENSG00000106004
Aliases homeobox A5
Synonyms homeo box A5, HOX1, HOX1.3, HOX1C, LOC100909641, LOC100911546, LOC103689922, LOC103692127
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human HOXA5 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • RNA polymerase II transcription regulatory region sequence-specific binding transcriptional activator activity
  • RNA polymerase II transcription factor activity, sequence-specific DNA binding
  • transcription regulator
  • hexapeptide domain
  • nucleic acid binding
  • double-stranded DNA binding
  • protein binding
  • sequence-specific DNA binding
  • homeodomain
  • transcription factor activity
  • DNA binding
  • YPWMK motif

Pathways

Biological processes and signaling networks where the HOXA5 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • pulmonary emphysema
  • hypoplasia
  • growth failure
  • metastasis
  • stenosis
  • uterine leiomyoma
  • leiomyomatosis
  • HER2 negative hormone receptor negative breast cancer
  • rotator cuff injury
regulated by
  • IGF1
  • lipopolysaccharide
  • tretinoin
  • dihydrotestosterone
  • mir23a/24-2/27a
  • SIRT1
  • PBX3
  • MEIS1
  • dsHIC1-2998
  • tetradecanoylphorbol acetate
role in cell
  • production in
  • migration
  • differentiation
  • proliferation
  • expression in
  • phosphorylation in
  • cell viability
  • growth
  • apoptosis
  • invasion by

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • chromatin

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human HOXA5 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • lung-associated mesenchyme development
  • multicellular organism growth
  • epithelial tube branching involved in lung morphogenesis
  • negative regulation of angiogenesis
  • lung goblet cell differentiation
  • anterior/posterior pattern specification
  • positive regulation of transcription from RNA polymerase II promoter
  • negative regulation of erythrocyte differentiation
  • cell-cell signaling involved in mammary gland development
  • mammary gland epithelial cell differentiation
  • lung alveolus development
  • mammary gland alveolus development
  • regulation of mammary gland epithelial cell proliferation
  • cell migration
  • intestinal epithelial cell maturation
  • positive regulation of myeloid cell differentiation
  • mesenchymal-epithelial cell signaling
  • embryonic skeletal system morphogenesis
  • bronchiole development
  • trachea cartilage morphogenesis
  • regulation of transcription from RNA polymerase II promoter
  • respiratory system process
  • thyroid gland development
  • positive regulation of gene expression
  • positive regulation of apoptotic process

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • chromatin

Molecular Function

What the gene product does at the molecular level
  • DNA binding
  • sequence-specific DNA binding transcription factor activity
  • protein binding
  • RNA polymerase II core promoter proximal region sequence-specific DNA binding
  • RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
  • sequence-specific DNA binding RNA polymerase II transcription factor activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.