VPS29 Gene Summary [Human]

This gene belongs to a group of vacuolar protein sorting (VPS) genes that, when functionally impaired, disrupt the efficient delivery of vacuolar hydrolases. The protein encoded by this gene is a component of a large multimeric complex, termed the retromer complex, which is involved in retrograde transport of proteins from endosomes to the trans-Golgi network. This VPS protein may be involved in the formation of the inner shell of the retromer coat for retrograde vesicles leaving the prevacuolar compartment. Alternative splice variants encoding different isoforms and representing non-protein coding transcripts have been found for this gene. [provided by RefSeq, Aug 2013]

Details

Type
Protein Coding
Official Symbol
VPS29
Official Name
VPS29 retromer complex component [Source:HGNC Symbol;Acc:HGNC:14340]
Ensembl ID
ENSG00000111237
Bio databases IDs NCBI: 51699 Ensembl: ENSG00000111237
Aliases VPS29 retromer complex component
Synonyms 2010015D08Rik, DC15, DC7, PEP11, Vps29 (predicted), VPS29 retromer complex component
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human VPS29 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • phosphoesterase, MJ0936 family
  • protein binding
  • metallophosphatase superfamily, metallophosphatase domain
  • Calcineurin-like phosphoesterase superfamily domain
  • transporter
  • Calcineurin-like phosphoesterase

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
regulated by
regulates

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • intracellular membrane-bounded organelle
  • cellular membrane
  • Plasma Membrane
  • endosomes
  • cytosol
  • cytosolic fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human VPS29 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • regulation of autophagy
  • retrograde transport, endosome to Golgi
  • intracellular protein transport
  • endocytic recycling

Cellular Component

Where in the cell the gene product is active
  • early endosome
  • endosome
  • intracellular membrane-bounded organelle
  • retromer complex
  • late endosome
  • cytosol
  • retromer complex, inner shell
  • endosome membrane

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • metal ion binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.