BAP1 Gene Summary [Human]

This gene belongs to the ubiquitin C-terminal hydrolase subfamily of deubiquitinating enzymes that are involved in the removal of ubiquitin from proteins. The encoded enzyme binds to the breast cancer type 1 susceptibility protein (BRCA1) via the RING finger domain of the latter and acts as a tumor suppressor. In addition, the enzyme may be involved in regulation of transcription, regulation of cell cycle and growth, response to DNA damage and chromatin dynamics. Germline mutations in this gene may be associated with tumor predisposition syndrome (TPDS), which involves increased risk of cancers including malignant mesothelioma, uveal melanoma and cutaneous melanoma. [provided by RefSeq, May 2013]

Details

Type
Protein Coding
Official Symbol
BAP1
Official Name
BRCA1 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:950]
Ensembl ID
ENSG00000163930
Bio databases IDs NCBI: 8314 Ensembl: ENSG00000163930
Aliases BRCA1 associated protein 1, ubiquitin carboxy-terminal hydrolase
Synonyms 2300006C11Rik, BRCA1 associated deubiquitinase 1, Brca1 associated protein 1, HUCEP-13, hucep-6, KURIS, mKIAA0272, TPDS1, Ubiquitin Carboxy-terminal Hydrolase, UBM2, UCHL2, uch-x4, UVM2
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human BAP1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Ubiquitin carboxyl-terminal hydrolases
  • conserved domain
  • peptidase
  • nuclear localization sequence
  • ubiquitin-specific protease
  • chromatin binding
  • enzyme
  • protein binding
  • ubiquitin C-terminal hydrolase domain
  • cysteine peptidase C12
  • DNA binding
  • ubiquitin-like-specific protease

Pathways

Biological processes and signaling networks where the BAP1 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • epithelial cancer
  • epithelial neoplasia
  • cancer
  • cutaneous melanoma
  • nasopharyngeal cancer
  • malignant pleural mesothelioma
  • organismal death
  • liver cancer
  • lung squamous cell carcinoma
regulates
role in cell
  • expression in
  • necrosis
  • proliferation
  • cell death
  • apoptosis
  • quantity
  • degradation in
  • phosphorylation in
  • growth
  • binding in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • Cytoplasm
  • Endoplasmic Reticulum
  • cytosol
  • nucleoplasm

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human BAP1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • protein modification process
  • monoubiquitinated protein deubiquitination
  • negative regulation of cell proliferation
  • regulation of cytokine production involved in inflammatory response
  • mitotic cell cycle
  • erythrocyte maturation
  • chromatin remodeling
  • leukocyte proliferation
  • negative regulation of transcription, DNA-dependent
  • in utero embryonic development
  • regulation of cell cycle
  • neutrophil differentiation
  • protein deubiquitination
  • thrombocyte differentiation
  • ubiquitin-dependent protein catabolic process
  • tissue homeostasis
  • neuron homeostasis
  • regulation of cell growth
  • nucleate erythrocyte differentiation
  • regulation of inflammatory response
  • gene expression
  • common myeloid progenitor cell proliferation
  • myeloid cell apoptotic process
  • protein K48-linked deubiquitination

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • cytoplasm
  • cytosol
  • PR-DUB complex
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • ubiquitin-specific protease activity
  • chromatin DNA binding
  • protein binding
  • chromatin binding
  • peptidase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.