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This gene encodes a type II classical cadherin from the cadherin superfamily, integral membrane proteins that mediate calcium-dependent cell-cell adhesion. Mature cadherin proteins are composed of a large N-terminal extracellular domain, a single membrane-spanning domain, and a small, highly conserved C-terminal cytoplasmic domain. The extracellular domain consists of 5 subdomains, each containing a cadherin motif, and appears to determine the specificity of the protein's homophilic cell adhesion activity. Type II (atypical) cadherins are defined based on their lack of a HAV cell adhesion recognition sequence specific to type I cadherins. [provided by RefSeq, Jul 2008]
A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human CDH9 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
Cadherin, Y-type LIR-motif
cell adhesion molecule binding
Cadherin repeat-like domain
cadherin binding
identical protein binding
Pathways
Biological processes and signaling networks where the CDH9 gene in human plays a role, providing insight into its function and relevance in health or disease.
The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
Plasma Membrane
glutaminergic synapse
cellular membrane
presynaptic membrane
postsynaptic membrane
synapse
axons
dendrites
Gene Ontology Annotations
Describes the biological processes, cellular components, and molecular functions associated with the human CDH9 gene, providing context for its role in the cell.
Biological Process
Functions and activities the gene product is involved in
calcium-dependent cell-cell adhesion
synapse assembly
cell-cell junction assembly
adherens junction organization
multicellular organismal development
cell morphogenesis
cell-cell adhesion mediated by cadherin
homophilic cell adhesion
cell migration
Cellular Component
Where in the cell the gene product is active
presynaptic membrane
adherens junction
postsynaptic membrane
catenin complex
plasma membrane
Molecular Function
What the gene product does at the molecular level
calcium ion binding
cadherin binding
beta-catenin binding
Gene-Specific Assays for Results You Can Trust
Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.