SLC10A2 Gene Summary [Human]

This gene encodes a sodium/bile acid cotransporter. This transporter is the primary mechanism for uptake of intestinal bile acids by apical cells in the distal ileum. Bile acids are the catabolic product of cholesterol metabolism, so this protein is also critical for cholesterol homeostasis. Mutations in this gene cause primary bile acid malabsorption (PBAM); muatations in this gene may also be associated with other diseases of the liver and intestines, such as familial hypertriglyceridemia (FHTG). [provided by RefSeq, Mar 2010]

Details

Type
Protein Coding
Official Symbol
SLC10A2
Official Name
solute carrier family 10 member 2 [Source:HGNC Symbol;Acc:HGNC:10906]
Ensembl ID
ENSG00000125255
Bio databases IDs NCBI: 6555 Ensembl: ENSG00000125255
Aliases solute carrier family 10 member 2
Synonyms 9130221J18Rik, ABAT, ASBT, IBAT, ISBAT, ISBT, NTCP2, PBAM, PBAM1, solute carrier family 10 member 2, solute carrier family 10, member 2
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human SLC10A2 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • bile acid:sodium symporter
  • bile acid transporter
  • protein binding
  • Sodium Bile acid symporter family
  • cytosolic tail domain
  • Predicted Na+-dependent transporter YfeH [General function prediction only]
  • transporter

Pathways

Biological processes and signaling networks where the SLC10A2 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
disease
  • gout
  • Crohn disease
  • Alagille syndrome
  • primary bile acid malabsorption type 1
  • progressive intrahepatic cholestasis
  • cholelithiasis
  • biliary atresia
  • primary biliary cirrhosis
  • hyperlipoproteinemia type IV
  • progressive familial intrahepatic cholestasis type 2
regulated by
regulates
  • cholesterol
  • lipid
  • Na+
  • ALP
  • cholesterol ester
  • NR1H4
  • glycocholic acid
  • taurocholic acid
  • bilirubin
  • bile salt
role in cell
  • necrosis

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • membrane fraction
  • Cytoplasm
  • intracellular space
  • perinuclear region
  • cellular membrane
  • cytoplasmic particles
  • apical cell surfaces
  • apical membrane
  • basolateral membrane
  • brush border
  • microvilli

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human SLC10A2 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • sodium ion transport
  • response to bacterium
  • transmembrane transport
  • bile acid and bile salt transport

Cellular Component

Where in the cell the gene product is active
  • microvillus
  • plasma membrane
  • apical plasma membrane

Molecular Function

What the gene product does at the molecular level
  • bile acid:sodium symporter activity
  • protein binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.