PTPRD Gene Summary [Human]

The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic transformation. This PTP contains an extracellular region, a single transmembrane segment and two tandem intracytoplasmic catalytic domains, and thus represents a receptor-type PTP. The extracellular region of this protein is composed of three Ig-like and eight fibronectin type III-like domains. Studies of the similar genes in chicken and fly suggest the role of this PTP is in promoting neurite growth, and regulating neurons axon guidance. Multiple alternatively spliced transcript variants of this gene have been reported. A related pseudogene has been identified on chromosome 5. [provided by RefSeq, Jan 2010]

Details

Type
Protein Coding
Official Symbol
PTPRD
Official Name
protein tyrosine phosphatase receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
Ensembl ID
ENSG00000153707
Bio databases IDs NCBI: 5789 Ensembl: ENSG00000153707
Aliases protein tyrosine phosphatase receptor type D
Synonyms 1110002J03RIK, 3000002J10Rik, B230219D21RIK, HPTP, HPTPD, HPTPDELTA, LOC100046763, LOC103692382, LOC120103064, LOC381719, MGC36851, Protein-tyrosine phosphatase delta, protein tyrosine phosphatase receptor type D, protein tyrosine phosphatase, receptor type, D, Protein-tyrosine phosphatase δ, PTPD, PTP-δ, RPTPDELTA, R-PTP-δ
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human PTPRD often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • protein-tyrosine-phoshatase
  • cell adhesion molecule binding
  • Protein tyrosine phosphatase, catalytic domain
  • Fibronectin type 3 domain
  • PTP_DSP_cys
  • Protein tyrosine phosphatase, catalytic domain motif
  • Protein tyrosine phosphatase, catalytic domain, undefined specificity
  • Protein-tyrosine phosphatase
  • cytoplasmic domain
  • Immunoglobulin like
  • phosphatase
  • intracellular domain
  • extracellular domain
  • catalytic domain
  • ectodomain
  • immunoglobulin domain
  • Immunoglobulin I-set domain
  • Purple acid Phosphatase, N-terminal domain
  • protein binding
  • receptor binding
  • PTPase domain
  • fibronectin III-like domain
  • FN3
  • transmembrane receptor protein tyrosine phosphatase
  • meA peptide
  • transmembrane domain
  • meB peptide
  • substrate binding domain

Pathways

Biological processes and signaling networks where the PTPRD gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • acute myeloid leukemia
  • epithelial cancer
  • Parkinson disease
  • nonalcoholic fatty liver disease
  • movement disorder
  • pathologic myopia
  • major depression
  • breast carcinoma
  • restless legs syndrome
  • COVID-19
regulated by
role in cell
  • expression in
  • phosphorylation in
  • adhesion
  • binding in
  • assembly
  • number
  • migration
  • differentiation
  • morphology
  • remodeling

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • glutaminergic synapse
  • cell surface
  • cellular membrane
  • cytosol
  • presynaptic membrane
  • plasma membrane projections
  • nuclear scaffolds
  • growth cone
  • synapse
  • zonula adherens
  • presynaptic terminals

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human PTPRD gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • positive regulation of dendritic spine morphogenesis
  • neuron differentiation
  • presynaptic membrane assembly
  • transmembrane receptor protein tyrosine phosphatase signaling pathway
  • protein dephosphorylation
  • heterophilic cell-cell adhesion
  • regulation of synaptic transmission
  • positive regulation of synapse assembly
  • phosphate-containing compound metabolic process
  • negative regulation of JAK-STAT cascade
  • regulation of immune response

Cellular Component

Where in the cell the gene product is active
  • presynaptic membrane
  • extracellular vesicular exosome
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • protein tyrosine phosphatase activity
  • cell adhesion molecule binding
  • transmembrane receptor protein tyrosine phosphatase activity
  • receptor binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.