PDLIM5 Gene Summary [Human]

This gene encodes a member of a family of proteins that possess a 100-amino acid PDZ domain at the N terminus and one to three LIM domains at the C-terminus. This family member functions as a scaffold protein that tethers protein kinases to the Z-disk in striated muscles. It is thought to function in cardiomyocyte expansion and in restraining postsynaptic growth of excitatory synapses. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Jan 2012]

Details

Type
Protein Coding
Official Symbol
PDLIM5
Official Name
PDZ and LIM domain 5 [Source:HGNC Symbol;Acc:HGNC:17468]
Ensembl ID
ENSG00000163110
Bio databases IDs NCBI: 10611 Ensembl: ENSG00000163110
Aliases PDZ and LIM domain 5
Synonyms 1110001A05Rik, ENH, ENH1, Enh2, Enh3, L9, LIM, PDLI5, PDZ and LIM domain 5, PDZ-LIM5
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human PDLIM5 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Domain of unknown function (DUF4749)
  • Domain present in PSD-95, Dlg, and ZO-1/2
  • LIM is a small protein-protein interaction domain, containing two zinc fingers
  • actin binding
  • actinin binding
  • protein kinase C binding
  • canonical PDZ domain
  • protein binding
  • PDZ domain
  • cpPDZ_Deg_HtrA-like

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • non-insulin-dependent diabetes mellitus
  • myocardial infarction
  • Alzheimer disease
  • endometriosis
  • prostate cancer
  • major depression
  • epithelial cancer
  • cancer
  • breast cancer
  • prostatic carcinoma
regulated by
regulates
role in cell
  • expression in
  • number
  • abnormal morphology
  • morphogenesis

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • glutaminergic synapse
  • postsynaptic region
  • cellular membrane
  • actin cytoskeleton
  • cytosol
  • Z line
  • postsynaptic density

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human PDLIM5 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • regulation of dendritic spine morphogenesis
  • heart development
  • muscle structure development
  • cell growth involved in cardiac muscle cell development
  • actin cytoskeleton organization
  • regulation of synapse assembly

Cellular Component

Where in the cell the gene product is active
  • Z disc
  • postsynaptic density
  • adherens junction
  • stress fiber
  • membrane
  • actin cytoskeleton
  • cytosol
  • filamentous actin
  • cell projection

Molecular Function

What the gene product does at the molecular level
  • protein kinase C binding
  • protein binding
  • actin binding
  • metal ion binding
  • actinin binding
  • muscle alpha-actinin binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.