LMO1 Gene Summary [Human]

This locus encodes a transcriptional regulator that contains two cysteine-rich LIM domains but lacks a DNA-binding domain. LIM domains may play a role in protein interactions; thus the encoded protein may regulate transcription by competitively binding to specific DNA-binding transcription factors. Alterations at this locus have been associated with acute lymphoblastic T-cell leukemia. Chromosomal rearrangements have been observed between this locus and at least two loci, the delta subunit of the T-cell antigen receptor gene and the LIM domain binding 1 gene. Alternatively spliced transcript variants have been described. [provided by RefSeq, Jul 2012]

Details

Type
Protein Coding
Official Symbol
LMO1
Official Name
LIM domain only 1 [Source:HGNC Symbol;Acc:HGNC:6641]
Ensembl ID
ENSG00000166407
Bio databases IDs NCBI: 4004 Ensembl: ENSG00000166407
Aliases LIM domain only 1
Synonyms Dat1, LIM domain only 1, Lim only 1, RBTN1, RHOM1, Rhombotin, TTG1
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human LMO1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • transcription regulator
  • LIM is a small protein-protein interaction domain, containing two zinc fingers
  • protein binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • non-insulin-dependent diabetes mellitus
  • HER2 negative hormone receptor negative breast cancer
  • neuroblastoma
  • neuroblastoma formation
  • T-lymphoblastic leukemia/lymphoma
  • lymphomagenesis
  • T acute lymphoblastic leukemia
  • susceptibility to neuroblastoma type 7
  • leukemogenesis
regulated by
regulates
role in cell
  • expression in
  • proliferation
  • growth
  • differentiation

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nucleoplasm

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human LMO1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • negative regulation of transcription from RNA polymerase II promoter
  • regulation of T cell homeostatic proliferation
  • positive regulation of transcription from RNA polymerase II promoter

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • transcription coactivator activity
  • metal ion binding

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