AKAP13

AKAP13 Gene Summary

The A-kinase anchor proteins (AKAPs) are a group of structurally diverse proteins which have the common function of binding to the regulatory subunit of protein kinase A (PKA) and confining the holoenzyme to discrete locations within the cell. This gene encodes a member of the AKAP family. Alternative splicing of this gene results in multiple transcript variants encoding different isoforms containing c-terminal dbl oncogene homology (DH) and pleckstrin homology (PH) domains. The DH domain is associated with guanine nucleotide exchange activation for the Rho/Rac family of small GTP binding proteins, resulting in the conversion of the inactive GTPase to the active form capable of transducing signals. The PH domain has multiple functions. Therefore, these isoforms function as scaffolding proteins to coordinate a Rho signaling pathway, function as protein kinase A-anchoring proteins and, in addition, enhance ligand-dependent activity of estrogen receptors alpha and beta. [provided by RefSeq, Jul 2012]

Details

Type
Processed Transcript
Official Symbol
AKAP13
Official Name
A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
Ensembl ID
ENSG00000170776
Bio databases IDs NCBI: 11214 Ensembl: ENSG00000170776
Aliases A-kinase anchoring protein 13
Synonyms
1700026G02RIK,5730522G15RIK,5830460E08RIK,AKAP-Lbc,A-kinase anchoring protein 13,A kinase anchor protein 13,ARHGEF13,BRX,c-lbc,HA-3,HT31,LBC,LOC233400,LOC293024,p47,P47 LBC oncogene,PRKA13,PROTO-LB,PROTO-LBC
Species
Human, Homo sapiens

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Flagellar FliJ protein
  • protein kinase A binding
  • alpha helix
  • enzyme binding
  • R2 binding domain
  • protein binding
  • Pleckstrin homology-like domain
  • RhoGEF domain
  • phosphorylation site
  • MAP-kinase scaffold protein
  • RhoGEF
  • protein kinase C conserved region 1 (C1 domain) superfamily
  • guanyl-nucleotide exchange factor
  • PH domain
  • guanine nucleotide exchange factor domain
  • Dbl homology domain

Pathways

Biological processes and signaling networks where the AKAP13 gene plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
  • PPARA
  • CCNF
  • PRNP
  • KSR1
  • YWHAB
  • ESR1
  • ESR2
  • YWHAE
  • HSP90B1
  • HNF4A
disease
  • neoplasia
  • epithelial cancer
  • coronary artery disease
  • breast cancer
  • nasopharyngeal cancer
  • nasopharyngeal carcinoma
  • frozen shoulder
  • gout
  • sarcomatoid nasopharyngeal carcinoma
  • sarcomatoid cancer
regulated by
  • lipopolysaccharide
  • dexamethasone
  • HGF
  • CREB1
  • TP53
  • STAT6
  • CALCA
  • IL4
  • forskolin
  • TNFSF11
regulates
  • NFkB (complex)
  • ERK
  • TNF
  • ERK1/2
  • p38 MAPK
  • CCL2
  • FOS
  • guanosine triphosphate
  • RHOA
  • JNK
role in cell
  • expression in
  • formation
  • binding in
  • differentiation
  • phosphorylation in
  • proliferation
  • size
  • formation in
  • growth
  • function

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • cortical actin cytoskeleton
  • perinuclear region
  • cellular membrane
  • actin cytoskeleton
  • cell cortex
  • Nucleus
  • Plasma Membrane
  • actin filaments
  • sarcomere
  • cytosol
  • sarcolemma
  • plasma

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the AKAP13 gene, providing context for its role in the cell.

BIOLOGICAL PROCESS

Functions and activities the gene product is involved in
  • regulation of sarcomere organization
  • heart development
  • regulation of Rho protein signal transduction
  • MAPK cascade
  • positive regulation of Rho protein signal transduction
  • G-protein coupled receptor signaling pathway
  • regulation of small GTPase mediated signal transduction
  • positive regulation of I-kappaB kinase/NF-kappaB cascade
  • adrenergic receptor signaling pathway
  • cardiac muscle cell differentiation
  • bone development

CELLULAR COMPONENT

Where in the cell the gene product is active
  • nucleus
  • cell cortex
  • membrane
  • actin cytoskeleton
  • cytosol
  • cortical actin cytoskeleton

MOLECULAR FUNCTION

What the gene product does at the molecular level
  • protein binding
  • metal ion binding
  • guanyl-nucleotide exchange factor activity
  • small GTPase binding
  • MAP-kinase scaffold activity
  • protein kinase A binding
  • binding, bridging

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.