HCFC1 Gene Summary [Human]

This gene is a member of the host cell factor family and encodes a protein with five Kelch repeats, a fibronectin-like motif, and six HCF repeats, each of which contains a highly specific cleavage signal. This nuclear coactivator is proteolytically cleaved at one of the six possible sites, resulting in the creation of an N-terminal chain and the corresponding C-terminal chain. The final form of this protein consists of noncovalently bound N- and C-terminal chains. The protein is involved in control of the cell cycle and transcriptional regulation during herpes simplex virus infection. Alternatively spliced variants which encode different protein isoforms have been described; however, not all variants have been fully characterized. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
HCFC1
Official Name
host cell factor C1 [Source:HGNC Symbol;Acc:HGNC:4839]
Ensembl ID
ENSG00000172534
Bio databases IDs NCBI: 3054 Ensembl: ENSG00000172534
Aliases host cell factor C1, VP16-accessory protein, protein phosphatase 1, regulatory subunit 89
Synonyms CFF, HCF, HCF-1, HFC1, host cell factor C1, LOC100911260, MAHCX, MRX3, PPP1R89, RGD1563804, VCAF, XLID3
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human HCFC1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • HCF-1 proteolytic repeat
  • Kelch motif
  • activation domain
  • transcription regulator
  • beta propeller
  • transcription co-activator
  • nucleic acid binding
  • protein binding activity, bridging
  • nuclear localization sequence
  • transcription activation domain
  • transcription factor binding
  • chromatin binding
  • protein binding
  • sequence-specific DNA binding
  • identical protein binding
  • zDHHC ankyrin repeat binding domain
  • acidic domain
  • DNA binding
  • Galactose oxidase, central domain
  • FN3
  • double-stranded DNA binding
  • chromatin binding domain
  • basic domain
  • WYF domain

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • methylmalonic acidemia with homocystinuria
  • hereditary disorder
  • methylmalonic acidemia with homocysteinemia cblX type
  • mental retardation
  • methylmalonic aciduria with homocystinuria cblC type
  • chronic periodontal disease
  • X-linked mental retardation
  • Turner syndrome
regulated by
regulates
role in cell
  • binding in
  • expression in
  • quantity
  • apoptosis
  • transactivation in
  • multinucleation
  • alignment
  • secretion in
  • segregation
  • cell cycle progression

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • interchromatin granule cluster fractions
  • nuclear fraction
  • Cytoplasm
  • gems
  • chromosome
  • nucleoplasm
  • nuclear bodies
  • nuclear speckles
  • Cajal bodies
  • perikaryon
  • axons
  • dendrites

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human HCFC1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • negative regulation of transcription from RNA polymerase II promoter
  • chromatin remodeling
  • positive regulation of transcription, DNA-dependent
  • positive regulation of gene expression
  • regulation of protein complex assembly
  • reactivation of latent virus
  • positive regulation of cell cycle
  • regulation of transcription, DNA-dependent
  • positive regulation of transcription from RNA polymerase II promoter
  • protein stabilization

Cellular Component

Where in the cell the gene product is active
  • Set1C/COMPASS complex
  • nucleus
  • cytoplasm
  • histone methyltransferase complex
  • membrane
  • macromolecular complex
  • neuronal cell body
  • NSL complex
  • histone acetyltransferase complex
  • MLL1 complex
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • identical protein binding
  • protein binding
  • transcription coactivator activity
  • cadherin binding
  • chromatin binding
  • protein binding, bridging

Gene-Specific Assays for Results You Can Trust

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