TAF13 Gene Summary [Human]

Initiation of transcription by RNA polymerase II requires the activities of more than 70 polypeptides. The protein that coordinates these activities is transcription factor IID (TFIID), which binds to the core promoter to position the polymerase properly, serves as the scaffold for assembly of the remainder of the transcription complex, and acts as a channel for regulatory signals. TFIID is composed of the TATA-binding protein (TBP) and a group of evolutionarily conserved proteins known as TBP-associated factors or TAFs. TAFs may participate in basal transcription, serve as coactivators, function in promoter recognition or modify general transcription factors (GTFs) to facilitate complex assembly and transcription initiation. This gene encodes a small subunit associated with a subset of TFIID complexes. This subunit interacts with TBP and with two other small subunits of TFIID, TAF10 and TAF11. There is a pseudogene located on chromosome 6. [provided by RefSeq, Jul 2008]

Details

Type
Nonsense Mediated Decay
Official Symbol
TAF13
Official Name
TATA-box binding protein associated factor 13 [Source:HGNC Symbol;Acc:HGNC:11546]
Ensembl ID
ENSG00000197780
Bio databases IDs NCBI: 6884 Ensembl: ENSG00000197780
Aliases TATA-box binding protein associated factor 13, Transcription initiation factor TFIID subunit 13
Synonyms 1810004N01Rik, 2010309N11Rik, MRT60, TAF2K, TAF(II)18, TAFII-18, TATA-box binding protein associated factor 13
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human TAF13 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • histone-fold domain
  • histone fold domain (HFD) superfamily
  • transcription regulator
  • protein binding
  • TATA-binding protein binding
  • DNA binding

Pathways

Biological processes and signaling networks where the TAF13 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • chronic lymphocytic leukemia
  • melanoma cancer
  • autosomal recessive mental retardation type 60
  • adenoma formation
  • Alzheimer disease
  • melanoma
  • non-insulin-dependent diabetes mellitus
  • chronic obstructive pulmonary disease
  • schizophrenia
  • glioblastoma
regulated by
regulates

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • Cytoplasm
  • nucleoplasm
  • nucleoli

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human TAF13 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • mRNA transcription from RNA polymerase II promoter
  • RNA polymerase II transcriptional preinitiation complex assembly
  • positive regulation of transcription initiation from RNA polymerase II promoter
  • transcription from RNA polymerase II promoter
  • transcription initiation, DNA-dependent
  • transcription initiation from RNA polymerase II promoter

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • transcription factor TFIID complex
  • nucleolus
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • DNA binding
  • protein binding
  • protein heterodimerization activity
  • general RNA polymerase II transcription factor activity
  • TBP-class protein binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.