HLA-B Gene Summary [Human]

HLA-B belongs to the HLA class I heavy chain paralogues. This class I molecule is a heterodimer consisting of a heavy chain and a light chain (beta-2 microglobulin). The heavy chain is anchored in the membrane. Class I molecules play a central role in the immune system by presenting peptides derived from the endoplasmic reticulum lumen. They are expressed in nearly all cells. The heavy chain is approximately 45 kDa and its gene contains 8 exons. Exon 1 encodes the leader peptide, exon 2 and 3 encode the alpha1 and alpha2 domains, which both bind the peptide, exon 4 encodes the alpha3 domain, exon 5 encodes the transmembrane region and exons 6 and 7 encode the cytoplasmic tail. Polymorphisms within exon 2 and exon 3 are responsible for the peptide binding specificity of each class one molecule. Typing for these polymorphisms is routinely done for bone marrow and kidney transplantation. Hundreds of HLA-B alleles have been described. [provided by RefSeq, Jul 2008]

Details

Type
Retained Intron
Official Symbol
HLA-B
Official Name
major histocompatibility complex, class I, B [Source:HGNC Symbol;Acc:HGNC:4932]
Ensembl ID
ENSG00000206450
Bio databases IDs NCBI: 3106 Ensembl: ENSG00000206450
Aliases major histocompatibility complex, class I, B
Synonyms AS, B-4901, Bw-50, Bw-52, Bw-54, Bw-55, Bw-56, HLA-B27, HLA B7, HLAC, LOC730410, major histocompatibility complex, class I, B, MHC 1-beta, MHC 1β
Species
Human, Homo sapiens

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human HLA-B often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Immunoglobulin C1-set domain
  • immunoglobulin domain
  • signal peptide
  • alpha2 domain
  • protein binding
  • receptor binding
  • alpha1 domain
  • Class I Histocompatibility antigen, domains alpha 1 and 2
  • cytoplasmic domain
  • MHC_I C-terminus
  • transmembrane/cytoplasmic domain
  • transmembrane domain
  • chaperone binding
  • transmembrane receptor
  • peptide antigen binding

Pathways

Biological processes and signaling networks where the HLA-B gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • chronic lymphocytic leukemia
  • plasma cell myeloma
  • chronic granulomatous disease
  • myelodysplastic syndrome
  • squamous cell lung cancer
  • lung squamous cell carcinoma
  • squamous-cell carcinoma
  • sepsis
  • rheumatoid arthritis
  • allergic rhinitis
regulated by
regulates
role in cell
  • phosphorylation in
  • expression in
  • loss
  • activation in
  • differentiation
  • apoptosis
  • molecular cleavage in
  • transactivation in
  • cytotoxicity
  • stimulation

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • cell surface
  • intracellular space
  • cellular membrane
  • vesicles
  • Golgi Apparatus
  • Endoplasmic Reticulum
  • secretory granule membrane
  • Golgi membrane
  • endosomal membrane
  • exosomes
  • phagosomes

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human HLA-B gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • regulation of dendritic cell differentiation
  • adaptive immune response
  • defense response
  • antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent
  • antigen processing and presentation of endogenous peptide antigen via MHC class Ib
  • protection from natural killer cell mediated cytotoxicity
  • regulation of T cell anergy
  • immune response
  • innate immune response
  • regulation of interleukin-6 production
  • detection of bacterium
  • positive regulation of T cell mediated cytotoxicity
  • regulation of interleukin-12 production

Cellular Component

Where in the cell the gene product is active
  • external side of plasma membrane
  • Golgi apparatus
  • endoplasmic reticulum
  • Golgi membrane
  • plasma membrane
  • cell surface
  • MHC class I protein complex
  • early endosome membrane
  • secretory granule membrane
  • extracellular space
  • extracellular vesicular exosome
  • membrane
  • ER to Golgi transport vesicle membrane
  • phagocytic vesicle membrane
  • recycling endosome membrane

Molecular Function

What the gene product does at the molecular level
  • peptide antigen binding
  • protein binding
  • chaperone binding
  • receptor binding
  • TAP binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.