Pcdh8 Gene Summary [Mouse]

This gene belongs to the protocadherin gene family, a subfamily of the cadherin superfamily. The gene encodes a type I transmembrane protein composed of an extracellular domain including 6 cadherin ectodomains, a single-pass transmembrane domain and a cytoplasmic tail. Unlike classical cadherins, which are generally encoded by 15-17 exons, this gene includes only 3 exons with the first large exon encoding the extracellular and transmembrane region. Although this gene product is capable of homophilic interaction, it appears to affect cell-cell adhesion indirectly by initiating signaling events that regulate classical cadherin-mediated adhesion. Based on studies on this protein and its orthologs, this protocadherin mainly functions in developing embryos and the central nervous system, but can also function as a tumor suppressor. Alternative splicing yielding isoforms with unique cytoplasmic tails has been reported. [provided by RefSeq, Sep 2009]

Details

Type
Protein Coding
Official Symbol
Pcdh8
Official Name
protocadherin 8 [Source:MGI Symbol;Acc:MGI:1306800]
Ensembl ID
ENSMUSG00000036422
Bio databases IDs NCBI: 18530 Ensembl: ENSMUSG00000036422
Aliases protocadherin 8
Synonyms 1700080P15Rik, ARCADLIN, PAPC, protocadherin 8
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Pcdh8 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • cytoplasmic domain
  • Cadherin-like
  • Cadherin repeat-like domain

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • schizophrenia
  • Parkinson disease
  • tumorigenesis
  • androgenic alopecia
regulated by
regulates
role in cell
  • long-term potentiation
  • adhesion
  • plasticity
  • aggregation
  • interaction
  • modulation
  • excitation
  • establishment

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • glutaminergic synapse
  • cell surface
  • cellular membrane
  • postsynaptic membrane
  • synapse
  • perikaryon
  • dendrites

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Pcdh8 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • somitogenesis
  • cell-cell signaling
  • regulation of synaptic transmission
  • synaptic transmission
  • morphogenesis of embryonic epithelium
  • cell adhesion
  • homophilic cell adhesion

Cellular Component

Where in the cell the gene product is active
  • presynaptic membrane
  • dendrite
  • postsynaptic membrane
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • calcium ion binding

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