Cntnap2 Gene Summary [Mouse]

Enables PDZ domain binding activity. Involved in several processes, including chemical synaptic transmission; nervous system development; and synapse organization. Acts upstream of or within glutamatergic neuron differentiation and neuron projection development. Located in juxtaparanode region of axon and membrane. Part of voltage-gated potassium channel complex. Is active in several cellular components, including axon initial segment; cerebellar granule cell to Purkinje cell synapse; and presynaptic active zone membrane. Is expressed in central nervous system; neural retina; and sciatic nerve. Used to study autism spectrum disorder and cortical dysplasia-focal epilepsy syndrome. Human ortholog(s) of this gene implicated in several diseases, including autism spectrum disorder (multiple); communication disorder (multiple); cortical dysplasia-focal epilepsy syndrome; major depressive disorder; and social phobia. Orthologous to human CNTNAP2 (contactin associated protein 2). [provided by Alliance of Genome Resources, Apr 2025]

Details

Type
Protein Coding
Official Symbol
Cntnap2
Official Name
contactin associated protein-like 2 [Source:MGI Symbol;Acc:MGI:1914047]
Ensembl ID
ENSMUSG00000039419
Bio databases IDs NCBI: 66797 Ensembl: ENSMUSG00000039419
Aliases contactin associated protein-like 2
Synonyms 5430425M22Rik, AUTS15, CASPR2, CDFE, contactin associated protein 2, contactin associated protein-like 2, mKIAA0868, NRXN4, PTHSL1
Species
Mouse, Mus musculus
OrthologiesHuman

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Cntnap2 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • extracellular domain
  • Coagulation factor 5/8 C-terminal domain, discoidin domain
  • protease binding
  • LamG
  • ectodomain
  • enzyme binding
  • protein binding
  • PDZ-domain binding
  • EGF_CA
  • putative band 4.1 homologues' binding motif
  • cytoplasmic domain
  • F5/8 type C domain
  • intracellular domain
  • ion channel binding
  • laminin G domain
  • FA58C

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • prostate cancer
  • hypertension
  • epilepsy
  • psychomotor agitation
  • cataract
  • colorectal cancer
  • behavioral deficit
  • glaucoma
  • idiopathic scoliosis
  • colon cancer
regulated by
regulates
role in cell
  • differentiation
  • number
  • quantity
  • aggregation in
  • proliferation
  • migration
  • accumulation in
  • adhesion
  • organization
  • arborization

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • membrane fraction
  • glutaminergic synapse
  • axon component
  • presynaptic regions
  • cell surface
  • postsynaptic region
  • membrane surface
  • cellular membrane
  • Golgi Apparatus
  • presynaptic membrane
  • synaptic membrane
  • axonal membrane
  • growth cone
  • neurites
  • paranodes
  • axon initial segments
  • juxtaparanodes
  • synapse
  • early endosomes
  • membrane rafts
  • perikaryon
  • axons
  • dendrites
  • excitatory synapses

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Cntnap2 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • cell proliferation
  • social behavior
  • prepulse inhibition
  • neuron projection development
  • neuron projection morphogenesis
  • vocal learning
  • neuron recognition
  • cell adhesion
  • brain development
  • cerebral cortex development
  • striatum development
  • learning
  • limbic system development
  • thalamus development
  • clustering of voltage-gated potassium channels
  • protein localization to juxtaparanode region of axon
  • superior temporal gyrus development
  • transmission of nerve impulse
  • adult behavior
  • vocalization behavior

Cellular Component

Where in the cell the gene product is active
  • paranode region of axon
  • paranodal junction
  • voltage-gated potassium channel complex
  • Golgi apparatus
  • juxtaparanode region of axon
  • synaptic membrane
  • neuronal cell body
  • perikaryon
  • cell surface
  • dendrite
  • early endosome
  • membrane
  • axolemma
  • axon

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • protease binding
  • ion channel binding
  • enzyme binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.