Irf8 Gene Summary [Mouse]

The protein encoded by this gene is a transcription factor that belongs to the interferon regulatory factor family. Proteins belonging to this family have a DNA binding domain at the amino terminus that contains five well-conserved tryptophan-rich repeats. This domain recognizes DNA sequences similar to the interferon-stimulated response element. The protein encoded by this gene promotes or suppresses lineage-specific genes to regulate the differentation of lymphoid and myeloid lineage cells. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2014]

Details

Type
Protein Coding
Official Symbol
Irf8
Official Name
interferon regulatory factor 8 [Source:MGI Symbol;Acc:MGI:96395]
Ensembl ID
ENSMUSG00000041515
Bio databases IDs NCBI: 15900 Ensembl: ENSMUSG00000041515
Aliases interferon regulatory factor 8
Synonyms H-ICSBP, HICSBP-1, ICSBP, ICSBP1, IMD32A, IMD32B, Interferon Consensus Sequence Binding Protein 1, interferon regulatory factor 8, Myls
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Irf8 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • transcription regulator
  • DNA binding domain
  • nucleic acid binding
  • IRF
  • Irf binding domain
  • Interferon-regulatory factor 3
  • protein binding
  • sequence-specific DNA binding
  • DNA binding
  • RNA polymerase II transcription factor activity, sequence-specific DNA binding
  • RNA polymerase II transcription regulatory region sequence-specific binding transcriptional repressor activity
  • double-stranded DNA binding
  • transcription factor activity
  • tyrosine phosphorylation site

Pathways

Biological processes and signaling networks where the Irf8 gene in mouse plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • hematologic cancer
  • hematological neoplasia
  • cancer
  • systemic lupus erythematosus
  • seizures
  • autosomal recessive interferon regulatory factor 8 deficiency
  • experimental autoimmune uveitis
  • advanced cancer
  • chronic myeloid leukemia
regulated by
  • trichostatin A
  • MYD88
  • IFNG
  • PXO1 122
  • VEGFA-antisense
  • PAGA
  • GRN
  • Lymphocytic choriomeningitis virus strain Armstrong
  • lipopolysaccharide
  • COP9 signalosome
regulates
role in cell
  • formation
  • binding
  • expression in
  • formation in
  • production in
  • activation in
  • quantity
  • apoptosis
  • growth
  • elimination

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • Cytoplasm
  • cytosol
  • nucleoplasm
  • chromatin

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Irf8 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • plasmacytoid dendritic cell differentiation
  • positive regulation of transcription from RNA polymerase II promoter
  • defense response to bacterium
  • immune system process
  • defense response to protozoan
  • regulation of transcription from RNA polymerase II promoter
  • negative regulation of transcription from RNA polymerase II promoter
  • germinal center B cell differentiation
  • positive regulation of interleukin-12 production
  • immune response
  • follicular B cell differentiation
  • cellular response to lipopolysaccharide
  • autophagy
  • positive regulation of interferon-gamma production
  • dendritic cell differentiation
  • positive regulation of apoptotic process
  • phagocytosis
  • myeloid cell differentiation
  • cellular response to interferon-gamma
  • regulation of type I interferon production

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • cytoplasm
  • cytosol
  • chromatin
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • RNA polymerase II core promoter proximal region sequence-specific DNA binding
  • RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
  • sequence-specific DNA binding RNA polymerase II transcription factor activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.