H1f5 Gene Summary [Mouse]

Histones are basic nuclear proteins responsible for nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is intronless and encodes a replication-dependent histone that is a member of the histone H1 family. Transcripts from this gene lack polyA tails but instead contain a palindromic termination element. [provided by RefSeq, Sep 2015]

Details

Type
Protein Coding
Official Symbol
H1f5
Official Name
H1.5 linker histone, cluster member [Source:MGI Symbol;Acc:MGI:1861461]
Ensembl ID
ENSMUSG00000058773
Bio databases IDs NCBI: 56702 Ensembl: ENSMUSG00000058773
Aliases H1.5 linker histone, cluster member
Synonyms H1.5 linker histone, cluster member, H1B, H1F5, H1s-3, HIST1H1B, LOC682425
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse H1f5 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • linker histone H1 and H5 family
  • H15
  • histone deacetylase binding
  • chromatin binding
  • protein binding
  • DNA binding

Pathways

Biological processes and signaling networks where the H1f5 gene in mouse plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • chronic obstructive pulmonary disease
  • latent tuberculosis
  • nonsyndromic cleft lip and palate
  • inguinal hernia
regulated by
regulates
  • SIRT1
  • DNA promoter
  • DNA endogenous promoter
  • RNA polymerase II
  • AXIN2
role in cell
  • expression in
  • organization

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • pH resistant lipid raft fraction
  • detergent resistant lipid raft fraction
  • heterochromatin
  • chromosome
  • nucleoplasm
  • nucleoli
  • chromatin

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse H1f5 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • muscle organ development
  • negative regulation of transcription from RNA polymerase II promoter
  • chromosome condensation
  • establishment of protein localization to chromatin
  • chromatin organization
  • protein stabilization
  • nucleosome assembly
  • negative regulation of DNA recombination

Cellular Component

Where in the cell the gene product is active
  • heterochromatin
  • nucleus
  • euchromatin
  • chromosome
  • nucleolus
  • nucleosome
  • chromatin
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • chromatin DNA binding
  • structural constituent of chromatin
  • RNA binding
  • protein binding
  • histone deacetylase binding
  • nucleosomal DNA binding
  • double-stranded DNA binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.