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Tight junctions represent one mode of cell-to-cell adhesion in epithelial or endothelial cell sheets, forming continuous seals around cells and serving as a physical barrier to prevent solutes and water from passing freely through the paracellular space. These junctions are comprised of sets of continuous networking strands in the outwardly facing cytoplasmic leaflet, with complementary grooves in the inwardly facing extracytoplasmic leaflet. This gene encodes a component of tight junction strands, which is a member of the claudin family. The protein is an integral membrane protein and is one of the entry cofactors for hepatitis C virus. The gene methylation may be involved in esophageal tumorigenesis. This gene is adjacent to another family member CLDN9 on chromosome 16.[provided by RefSeq, Aug 2010]
A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Cldn6 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
viral receptor
PMP-22/EMP/MP20/Claudin family
extracellular loop
protein binding
cytosolic tail domain
identical protein binding
Pathways
Biological processes and signaling networks where the Cldn6 gene in rat plays a role, providing insight into its function and relevance in health or disease.
The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
Plasma Membrane
apicolateral membrane
cellular membrane
tight junctions
Gene Ontology Annotations
Describes the biological processes, cellular components, and molecular functions associated with the rat Cldn6 gene, providing context for its role in the cell.
Biological Process
Functions and activities the gene product is involved in
viral entry into host cell
calcium-independent cell-cell adhesion
tight junction assembly
cell adhesion
Cellular Component
Where in the cell the gene product is active
apicolateral plasma membrane
tight junction
plasma membrane
Molecular Function
What the gene product does at the molecular level
identical protein binding
protein binding
structural molecule activity
viral receptor activity
Gene-Specific Assays for Results You Can Trust
Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.