Eloc Gene Summary [Rat]

This gene encodes the protein elongin C, which is a subunit of the transcription factor B (SIII) complex. The SIII complex is composed of elongins A/A2, B and C. It activates elongation by RNA polymerase II by suppressing transient pausing of the polymerase at many sites within transcription units. Elongin A functions as the transcriptionally active component of the SIII complex, whereas elongins B and C are regulatory subunits. Elongin A2 is specifically expressed in the testis, and capable of forming a stable complex with elongins B and C. The von Hippel-Lindau tumor suppressor protein binds to elongins B and C, and thereby inhibits transcription elongation. Multiple alternatively spliced transcript variants encoding two distinct isoforms have been identified. [provided by RefSeq, Mar 2011]

Details

Type
Protein Coding
Official Symbol
Eloc
Official Name
elongin C [Source:RGD Symbol;Acc:620658]
Ensembl ID
ENSRNOG00000031730
Bio databases IDs NCBI: 64525 Ensembl: ENSRNOG00000031730
Aliases elongin C
Synonyms 2610043E24Rik, 2610301I15RIK, Elongation Factor SIII p15 Subunit, Elongin-C, SIII, SIII p15, TCEB1, Tcebf1
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Eloc often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • transcription regulator
  • binding protein
  • BTB_POZ
  • transcription factor binding
  • protein binding

Pathways

Biological processes and signaling networks where the Eloc gene in rat plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
disease
  • renal clear cell adenocarcinoma
  • renal clear cell cancer
  • breast cancer
  • renal cell carcinoma
  • renal cell cancer
  • Waldenström macroglobulinemia
  • infection by HIV-1
regulated by
regulates
role in cell
  • apoptosis
  • accumulation in
  • turnover in
  • polyubiquitination in
  • degradation in
  • mitosis

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • Golgi Apparatus
  • cytosol
  • nucleoplasm
  • cytosolic fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Eloc gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • transcription initiation from RNA polymerase II promoter
  • protein ubiquitination
  • ubiquitin-dependent protein catabolic process
  • regulation of transcription from RNA polymerase II promoter

Cellular Component

Where in the cell the gene product is active
  • cytosol
  • Cul2-RING ubiquitin ligase complex
  • elongin complex
  • Cul5-RING ubiquitin ligase complex
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • transcription corepressor binding
  • protein binding
  • protein binding, bridging

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.