LFNG Gene Summary [Human]

This gene is a member of the glycosyltransferase 31 gene family. Members of this gene family, which also includes the MFNG (GeneID: 4242) and RFNG (GeneID: 5986) genes, encode evolutionarily conserved glycosyltransferases that act in the Notch signaling pathway to define boundaries during embryonic development. While their genomic structure is distinct from other glycosyltransferases, these proteins have a fucose-specific beta-1,3-N-acetylglucosaminyltransferase activity that leads to elongation of O-linked fucose residues on Notch, which alters Notch signaling. The protein encoded by this gene is predicted to be a single-pass type II Golgi membrane protein but it may also be secreted and proteolytically processed like the related proteins in mouse and Drosophila (PMID: 9187150). Mutations in this gene have been associated with autosomal recessive spondylocostal dysostosis 3. [provided by RefSeq, May 2018]

Details

Type
Protein Coding
Official Symbol
LFNG
Official Name
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]
Ensembl ID
ENSG00000106003
Bio databases IDs NCBI: 3955 Ensembl: ENSG00000106003
Aliases LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Synonyms LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, LFNG O-fucosylpeptide 3-β-N-acetylglucosaminyltransferase, SCDO3
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human LFNG often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • acetylglucosaminyltransferase
  • galactosyltransferase
  • enzyme

Pathways

Biological processes and signaling networks where the LFNG gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • organismal death
  • spondylocostal dysostosis type 3
  • Crohn disease
  • chronic periodontal disease
  • pancreatic cancer
regulates
role in cell
  • proliferation
  • expression in
  • generation
  • migration
  • invasion by
  • binding
  • differentiation
  • quantity
  • maturation
  • development

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • perinuclear region
  • Golgi Apparatus
  • Golgi membrane

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human LFNG gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • T cell differentiation
  • marginal zone B cell differentiation
  • regulation of somitogenesis
  • somitogenesis
  • regulation of Notch signaling pathway
  • compartment pattern specification
  • positive regulation of Notch signaling pathway
  • positive regulation of meiotic cell cycle
  • ovarian follicle development
  • organ morphogenesis

Cellular Component

Where in the cell the gene product is active
  • Golgi membrane
  • extracellular region

Molecular Function

What the gene product does at the molecular level
  • metal ion binding
  • O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.