MKRN1 Gene Summary [Human]

This gene encodes a protein that belongs to a novel class of zinc finger proteins. The encoded protein functions as a transcriptional co-regulator, and as an E3 ubiquitin ligase that promotes the ubiquitination and proteasomal degradation of target proteins. The protein encoded by this gene is thought to regulate RNA polymerase II-catalyzed transcription. Substrates for this protein's E3 ubiquitin ligase activity include the capsid protein of the West Nile virus and the catalytic subunit of the telomerase ribonucleoprotein. This protein controls cell cycle arrest and apoptosis by regulating p21, a cell cycle regulator, and the tumor suppressor protein p53. Pseudogenes of this gene are present on chromosomes 1, 3, 9, 12 and 20, and on the X chromosome. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Apr 2014]

Details

Type
Protein Coding
Official Symbol
MKRN1
Official Name
makorin ring finger protein 1 [Source:HGNC Symbol;Acc:HGNC:7112]
Ensembl ID
ENSG00000133606
Bio databases IDs NCBI: 23608 Ensembl: ENSG00000133606
Aliases makorin ring finger protein 1
Synonyms makorin ring finger protein 1, makorin, ring finger protein, 1, RFP, RNF61
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human MKRN1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • E3 ubiquitin-protein ligase makorin, C-terminal
  • zinc finger
  • CCCH-type zinc finger
  • ubiquitin protein ligase activity
  • RING finger (Really Interesting New Gene) domain and U-box domain superfamily
  • Ring finger
  • chromatin binding
  • enzyme
  • Zinc finger C-x8-C-x5-C-x3-H type (and similar)
  • protein binding
  • zinc finger domain
  • Zinc finger, C3HC4 type (RING finger)

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • endometriosis
  • backache
  • organismal death
  • colorectal cancer
regulated by
  • LY-411,575
  • ESX1
  • cisplatin
  • PTEN
  • mibolerone
regulates
role in cell
  • degradation in
  • differentiation
  • expression in
  • cell viability
  • migration
  • cell death
  • invasion by
  • colony formation by
  • replication in
  • ubiquitination in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • Nucleus
  • cytosol
  • dendrite initial segments
  • perikaryon
  • axons
  • dendrites

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human MKRN1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • protein polyubiquitination
  • protein ubiquitination

Cellular Component

Where in the cell the gene product is active
  • cytosol

Molecular Function

What the gene product does at the molecular level
  • RNA binding
  • protein binding
  • metal ion binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.