DDB2 Gene Summary [Human]

This gene encodes a protein that is necessary for the repair of ultraviolet light-damaged DNA. This protein is the smaller subunit of a heterodimeric protein complex that participates in nucleotide excision repair, and this complex mediates the ubiquitylation of histones H3 and H4, which facilitates the cellular response to DNA damage. This subunit appears to be required for DNA binding. Mutations in this gene cause xeroderma pigmentosum complementation group E, a recessive disease that is characterized by an increased sensitivity to UV light and a high predisposition for skin cancer development, in some cases accompanied by neurological abnormalities. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2014]

Details

Type
Protein Coding
Official Symbol
DDB2
Official Name
damage specific DNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2718]
Ensembl ID
ENSG00000134574
Bio databases IDs NCBI: 1643 Ensembl: ENSG00000134574
Aliases damage specific DNA binding protein 2, xeroderma pigmentosum group E protein, UV-damaged DNA-binding protein 2, DDB p48 subunit
Synonyms 2610043A19Rik, damage specific DNA binding protein 2, DDBB, UV-DDB2, XPE
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human DDB2 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • transcription regulator
  • binding protein
  • WD40 repeats
  • damaged DNA binding
  • ubiquitin-protein transferase activity
  • WD domain, G-beta repeat
  • WD40
  • protein binding
  • UV-damaged DNA-binding factor 1 binding domain
  • DNA binding

Pathways

Biological processes and signaling networks where the DDB2 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • epithelial neoplasia
  • epithelial cancer
  • cancer
  • squamous-cell carcinoma
  • squamous cell cancer
  • T-cell non-Hodgkin disease
  • androgenic alopecia
  • cardiomyopathy
  • xeroderma pigmentosum complementation group E DDB-negative form
regulated by
role in cell
  • expression in
  • apoptosis
  • cell death
  • degradation in
  • colony formation
  • activation in
  • proliferation
  • accumulation in
  • motility
  • invasiveness

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • cell junction
  • nucleoplasm
  • chromatin

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human DDB2 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • DNA repair
  • pyrimidine dimer repair
  • UV-damage excision repair
  • protein polyubiquitination
  • cellular response to UV
  • nucleotide-excision repair
  • response to UV
  • response to DNA damage stimulus
  • protein autoubiquitination

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • Cul4A-RING ubiquitin ligase complex
  • cell junction
  • Cul4B-RING ubiquitin ligase complex
  • macromolecular complex
  • chromatin
  • CUL4 RING ubiquitin ligase complex
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • DNA binding
  • ubiquitin-protein ligase activity
  • protein binding
  • damaged DNA binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.