VTI1A Gene Summary [Human]

The protein encoded by this gene is a member of the family of soluble N-ethylmaleimide-sensitive fusion protein-attachment protein receptors (SNAREs) that function in intracellular trafficking. This family member is involved in vesicular transport between endosomes and the trans-Golgi network. It is a vesicle-associated SNARE (v-SNARE) that interacts with target membrane SNAREs (t-SNAREs). Polymorphisms in this gene have been associated with binocular function, and also with susceptibility to colorectal and lung cancers. A recurrent rearrangement has been found between this gene and the transcription factor 7-like 2 (TCF7L2) gene in colorectal cancers. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2015]

Details

Type
Processed Transcript
Official Symbol
VTI1A
Official Name
vesicle transport through interaction with t-SNAREs 1A [Source:HGNC Symbol;Acc:HGNC:17792]
Ensembl ID
ENSG00000151532
Bio databases IDs NCBI: 143187 Ensembl: ENSG00000151532
Aliases vesicle transport through interaction with t-SNAREs 1A
Synonyms 1110014F16RIK, 1110018K19RIK, 4921537J05RIK, DD6A4-2(1), MMDS3, MVti1, MVti1a, vesicle transport through interaction with t-SNAREs 1A, Vti1, Vti1b, VTI1RP2
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human VTI1A often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • SNAP receptor
  • Vesicle transport v-SNARE protein N-terminus
  • cytoplasmic domain
  • Helical region found in SNAREs
  • Snare region anchored in the vesicle membrane C-terminus
  • protein binding
  • SNARE motif
  • 7TM-HD extracellular

Pathways

Biological processes and signaling networks where the VTI1A gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • colorectal cancer
  • lung carcinoma
  • lung carcinoma process
  • non-insulin-dependent diabetes mellitus
  • colonic polyp
  • non-small cell lung carcinoma
  • non-small cell lung cancer
  • multiple sclerosis
  • lung adenocarcinoma
  • lung adenocarcinoma formation
regulated by
regulates
  • ADIPOQ
  • 2-deoxyglucose
  • agar
  • Stxb shiga protein
  • EGF
role in cell
  • apoptosis
  • growth
  • outgrowth
  • fusion
  • autophagy by
  • fusion in
  • guidance

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • membrane fraction
  • synaptic vesicle membrane
  • intracellular membrane-bounded organelle
  • perinuclear Golgi regions
  • perinuclear membrane
  • intracellular space
  • perinuclear region
  • cellular membrane
  • endosomes
  • Golgi Apparatus
  • cisternae
  • Golgi membrane
  • trans Golgi network
  • synaptic vesicles
  • nerve ending
  • synapse
  • autophagic vacuoles
  • early endosomes
  • perikaryon
  • clathrin-coated vesicles
  • detergent-soluble fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human VTI1A gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • ER to Golgi vesicle-mediated transport
  • voluntary musculoskeletal movement
  • autophagy
  • intra-Golgi vesicle-mediated transport
  • synaptic vesicle to endosome fusion
  • intracellular protein transport
  • retrograde transport, endosome to Golgi
  • macroautophagy
  • endocytic recycling
  • vesicle fusion with Golgi apparatus
  • Golgi to vacuole transport

Cellular Component

Where in the cell the gene product is active
  • synaptic vesicle
  • Golgi membrane
  • Golgi apparatus
  • neuronal cell body
  • neuron projection terminus
  • autophagic vacuole
  • endoplasmic reticulum membrane
  • late endosome membrane
  • endosome
  • perinuclear region of cytoplasm
  • intracellular membrane-bounded organelle
  • ER to Golgi transport vesicle membrane
  • SNARE complex
  • cytosol
  • clathrin-coated vesicle
  • trans-Golgi network membrane

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • SNAP receptor activity
  • SNARE binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.