EPHB1 Gene Summary [Human]

Ephrin receptors and their ligands, the ephrins, mediate numerous developmental processes, particularly in the nervous system. Based on their structures and sequence relationships, ephrins are divided into the ephrin-A (EFNA) class, which are anchored to the membrane by a glycosylphosphatidylinositol linkage, and the ephrin-B (EFNB) class, which are transmembrane proteins. The Eph family of receptors are divided into 2 groups based on the similarity of their extracellular domain sequences and their affinities for binding ephrin-A and ephrin-B ligands. Ephrin receptors make up the largest subgroup of the receptor tyrosine kinase (RTK) family. The protein encoded by this gene is a receptor for ephrin-B family members. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
EPHB1
Official Name
EPH receptor B1 [Source:HGNC Symbol;Acc:HGNC:3392]
Ensembl ID
ENSG00000154928
Bio databases IDs NCBI: 2047 Ensembl: ENSG00000154928
Aliases EPH receptor B1
Synonyms 9330129L11, C130099E04Rik, Cek6, Efnb1r, ELK, ELKH, Ephb2, Ephbi, EPH receptor B1, Eph receptor b2, EPHT2, Erk, Hek6, NET
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human EPHB1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • extracellular domain
  • Ligand Binding Domain of Ephrin Receptors
  • Protein kinase (unclassified specificity)
  • Protein tyrosine and serine/threonine kinase
  • axon guidance receptor
  • SAM (Sterile alpha motif )
  • SAM domain
  • protein binding
  • Fibronectin type 3 domain
  • protein-tyrosine kinase
  • Protein kinase domain
  • kinase
  • Serine/Threonine protein kinases, catalytic domain
  • kinase domain
  • Sterile alpha motif
  • transmembrane-ephrin receptor
  • binding protein
  • Protein Kinases, catalytic domain
  • Transmembrane domain of Ephrin Receptor A1 Protein Tyrosine Kinase
  • cytoplasmic domain
  • FN3
  • SAM domain (Sterile alpha motif)
  • Tyrosine kinase, catalytic domain
  • Ephrin receptor ligand binding domain

Pathways

Biological processes and signaling networks where the EPHB1 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • lung carcinoma
  • lung carcinoma process
  • cutaneous melanoma
  • cutaneous melanoma cancer
  • metabolic syndrome X
  • lung adenocarcinoma
  • lung adenocarcinoma formation
  • neuroticism
  • chronic pain
  • insomnia
regulated by
  • TGF beta
  • CD3 (complex)
  • Immunoglobulin
  • dexamethasone
  • p38 MAPK
  • JNK
  • demeclocycline
  • MAPK1
  • EFNB1
  • DNMT1
role in cell
  • differentiation
  • proliferation
  • binding in
  • adhesion
  • migration
  • cell viability
  • expression in
  • recruitment in
  • formation
  • phosphorylation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • synaptic plasma membrane fractions
  • glutaminergic synapse
  • Cytoplasm
  • cell surface
  • Extracellular Space
  • cellular membrane
  • Nucleus
  • Endoplasmic Reticulum
  • cytosol
  • presynaptic membrane
  • postsynaptic membrane
  • endosomal membrane
  • dendritic spines
  • synapse
  • membrane rafts
  • filopodia
  • filopodial tip
  • axons
  • dendrites
  • postsynaptic density
  • synaptosomal fractions

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human EPHB1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • hindbrain tangential cell migration
  • neural precursor cell proliferation
  • axon guidance
  • central nervous system projection neuron axonogenesis
  • protein autophosphorylation
  • neurogenesis
  • protein phosphorylation
  • immunological synapse formation
  • cell chemotaxis
  • optic nerve morphogenesis
  • angiogenesis
  • satellite cell activation
  • positive regulation of synapse assembly
  • retinal ganglion cell axon guidance
  • dendritic spine development
  • regulation of JNK cascade
  • dendritic spine morphogenesis
  • regulation of ERK1 and ERK2 cascade
  • camera-type eye morphogenesis
  • ephrin receptor signaling pathway
  • establishment of cell polarity
  • regulation of synaptic transmission
  • cell-substrate adhesion
  • detection of temperature stimulus involved in sensory perception of pain

Cellular Component

Where in the cell the gene product is active
  • early endosome membrane
  • dendrite
  • extracellular vesicular exosome
  • membrane raft
  • cytosol
  • filopodium tip
  • endoplasmic reticulum
  • extracellular region
  • plasma membrane
  • axon

Molecular Function

What the gene product does at the molecular level
  • ATP binding
  • protein binding
  • axon guidance receptor activity
  • transmembrane-ephrin receptor activity

Gene-Specific Assays for Results You Can Trust

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