PTPN13 Gene Summary [Human]

The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic transformation. This PTP is a large intracellular protein. It has a catalytic PTP domain at its C-terminus and two major structural domains: a region with five PDZ domains and a FERM domain that binds to plasma membrane and cytoskeletal elements. This PTP was found to interact with, and dephosphorylate, Fas receptor and IkappaBalpha through the PDZ domains. This suggests it has a role in Fas mediated programmed cell death. This PTP was also shown to interact with GTPase-activating protein, and thus may function as a regulator of Rho signaling pathways. Four alternatively spliced transcript variants, which encode distinct proteins, have been reported. [provided by RefSeq, Oct 2008]

Details

Type
Protein Coding
Official Symbol
PTPN13
Official Name
protein tyrosine phosphatase non-receptor type 13 [Source:HGNC Symbol;Acc:HGNC:9646]
Ensembl ID
ENSG00000163629
Bio databases IDs NCBI: 5783 Ensembl: ENSG00000163629
Aliases protein tyrosine phosphatase non-receptor type 13, APO-1/CD95 (Fas)-associated phosphatase
Synonyms FAP-1, Fas-associated phosphatase-1, hPTP1E, LOC100910240, LOC498331, PNP1, protein TYROSINE PHOSPHATASE1E, protein tyrosine phosphatase non-receptor type 13, protein tyrosine phosphatase, non-receptor type 13, ptp, PTP1E, PTP-BAS, PTP-BAS5E, PTP-BL, PTPL1, PTPLE, Ptpri, RIP
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human PTPN13 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • protein-tyrosine-phoshatase
  • Protein tyrosine phosphatase, catalytic domain
  • PTP_DSP_cys
  • Protein tyrosine phosphatase, catalytic domain motif
  • Protein tyrosine phosphatase, catalytic domain, undefined specificity
  • FERM domain
  • Protein-tyrosine phosphatase
  • phosphatase
  • FERM domain B-lobe
  • FERM central domain
  • Band 4.1 homologues
  • Domain present in PSD-95, Dlg, and ZO-1/2
  • canonical PDZ domain
  • protein binding
  • Pleckstrin homology-like domain
  • PDZ domain
  • phosphatase domain
  • PTPase domain
  • FERM N-terminal domain
  • phosphoinositide 3-kinase binding
  • Protein Kinases, catalytic domain
  • Unstructured linker region on PTN13 protein between PDZ
  • Ubl1_cv_Nsp3_N-like
  • cpPDZ_Deg_HtrA-like
  • FERM C-terminal PH-like domain
  • cpPDZ_RseP_YlbL-like

Pathways

Biological processes and signaling networks where the PTPN13 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
disease
  • neoplasia
  • obesity
  • pancreatic adenocarcinoma
  • pancreatic epithelial cancer
  • organismal death
  • tinnitus
  • Rett syndrome
  • latent tuberculosis
  • infection by bacteria
regulated by
regulates
role in cell
  • proliferation
  • expression in
  • growth
  • survival
  • binding in
  • signaling in
  • apoptosis
  • number
  • assembly
  • degradation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • insoluble fractions
  • detergent resistant lipid raft fraction
  • fibrillar center
  • Nucleus
  • Plasma Membrane
  • midbody
  • cytosol
  • apical cell surfaces
  • nucleoplasm
  • membrane rafts
  • perikaryon
  • lamellipodia

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human PTPN13 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • regulation of protein kinase B signaling cascade
  • negative regulation of protein phosphorylation
  • cellular response to toxin
  • protein dephosphorylation
  • peptidyl-tyrosine dephosphorylation

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • cytoskeleton
  • extracellular vesicular exosome
  • cytoplasm
  • cell body
  • cytosol
  • plasma membrane
  • fibrillar center
  • lamellipodium
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • protein tyrosine phosphatase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.